Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RFC5P40937 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC5P40937 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
RFC5P40937 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.37■□□□□ 0.05
RFC5P40937 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC15.37■□□□□ 0.05
RFC5P40937 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RFC5P40937 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC5P40937 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC5P40937 SSR4-202ENST00000370085 526 ntTSL 2 BASIC15.37■□□□□ 0.05
RFC5P40937 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC15.37■□□□□ 0.05
RFC5P40937 ACTG1P19-201ENST00000418987 1116 ntBASIC15.37■□□□□ 0.05
RFC5P40937 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC15.37■□□□□ 0.05
RFC5P40937 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC15.37■□□□□ 0.05
RFC5P40937 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC15.37■□□□□ 0.05
RFC5P40937 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
RFC5P40937 EEF1GP8-201ENST00000506566 1154 ntBASIC15.37■□□□□ 0.05
RFC5P40937 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC15.37■□□□□ 0.05
RFC5P40937 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC15.37■□□□□ 0.05
RFC5P40937 IGHV3-37-201ENST00000518544 340 ntBASIC15.37■□□□□ 0.05
RFC5P40937 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC15.37■□□□□ 0.05
RFC5P40937 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC15.37■□□□□ 0.05
RFC5P40937 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC15.37■□□□□ 0.05
RFC5P40937 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC15.37■□□□□ 0.05
RFC5P40937 VENTXP3-201ENST00000546480 773 ntBASIC15.37■□□□□ 0.05
RFC5P40937 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC15.37■□□□□ 0.05
RFC5P40937 AP001065.2-201ENST00000617205 644 ntBASIC15.37■□□□□ 0.05
RFC5P40937 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC15.37■□□□□ 0.05
RFC5P40937 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
RFC5P40937 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
RFC5P40937 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC5P40937 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
RFC5P40937 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC5P40937 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC15.37■□□□□ 0.05
RFC5P40937 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC5P40937 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC5P40937 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RFC5P40937 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
RFC5P40937 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RFC5P40937 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC5P40937 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC15.36■□□□□ 0.05
RFC5P40937 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
RFC5P40937 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RFC5P40937 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.36■□□□□ 0.05
RFC5P40937 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.36■□□□□ 0.05
RFC5P40937 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.36■□□□□ 0.05
RFC5P40937 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RFC5P40937 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RFC5P40937 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RFC5P40937 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RFC5P40937 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC15.36■□□□□ 0.05
RFC5P40937 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC5P40937 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RFC5P40937 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC5P40937 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC5P40937 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC15.36■□□□□ 0.05
RFC5P40937 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RFC5P40937 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.36■□□□□ 0.05
RFC5P40937 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC15.36■□□□□ 0.05
RFC5P40937 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.36■□□□□ 0.05
RFC5P40937 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC5P40937 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC5P40937 AC106827.1-201ENST00000366454 431 ntBASIC15.36■□□□□ 0.05
RFC5P40937 OR7E115P-201ENST00000382617 1024 ntBASIC15.36■□□□□ 0.05
RFC5P40937 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC15.36■□□□□ 0.05
RFC5P40937 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RFC5P40937 AC012497.1-201ENST00000429392 575 ntBASIC15.36■□□□□ 0.05
RFC5P40937 AC253536.4-201ENST00000440539 267 ntBASIC15.36■□□□□ 0.05
RFC5P40937 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RFC5P40937 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC15.36■□□□□ 0.05
RFC5P40937 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC15.36■□□□□ 0.05
RFC5P40937 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC15.36■□□□□ 0.05
RFC5P40937 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC15.36■□□□□ 0.05
RFC5P40937 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC15.36■□□□□ 0.05
RFC5P40937 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC15.36■□□□□ 0.05
RFC5P40937 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
RFC5P40937 U62317.3-201ENST00000608319 855 ntBASIC15.36■□□□□ 0.05
RFC5P40937 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC5P40937 BEND3P1-201ENST00000421591 1944 ntBASIC15.36■□□□□ 0.05
RFC5P40937 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC5P40937 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC5P40937 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC5P40937 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
RFC5P40937 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC5P40937 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.36■□□□□ 0.05
RFC5P40937 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC5P40937 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.36■□□□□ 0.05
RFC5P40937 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC5P40937 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFC5P40937 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RFC5P40937 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC15.35■□□□□ 0.05
RFC5P40937 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RFC5P40937 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC5P40937 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
RFC5P40937 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RFC5P40937 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC5P40937 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC5P40937 AC025183.3-201ENST00000623526 1482 ntBASIC15.35■□□□□ 0.05
RFC5P40937 AL359881.3-201ENST00000602640 1721 ntBASIC15.35■□□□□ 0.05
RFC5P40937 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RFC5P40937 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms