Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA3P32297 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA3P32297 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA3P32297 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC14.76□□□□□ -0.05
CHRNA3P32297 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA3P32297 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CHRNA3P32297 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA3P32297 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA3P32297 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA3P32297 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.76□□□□□ -0.05
CHRNA3P32297 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA3P32297 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC14.76□□□□□ -0.05
CHRNA3P32297 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CHRNA3P32297 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA3P32297 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA3P32297 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA3P32297 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CHRNA3P32297 ACTG1P2-201ENST00000415776 1125 ntBASIC14.76□□□□□ -0.05
CHRNA3P32297 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.76□□□□□ -0.05
CHRNA3P32297 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.76□□□□□ -0.05
CHRNA3P32297 ACTG1P11-201ENST00000425411 1125 ntBASIC14.76□□□□□ -0.05
CHRNA3P32297 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.76□□□□□ -0.05
CHRNA3P32297 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.76□□□□□ -0.05
CHRNA3P32297 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.76□□□□□ -0.05
CHRNA3P32297 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.76□□□□□ -0.05
CHRNA3P32297 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.76□□□□□ -0.05
CHRNA3P32297 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CHRNA3P32297 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.76□□□□□ -0.05
CHRNA3P32297 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.76□□□□□ -0.05
CHRNA3P32297 AL606495.2-201ENST00000605867 535 ntBASIC14.76□□□□□ -0.05
CHRNA3P32297 NAP1L6-202ENST00000641404 1222 ntBASIC14.76□□□□□ -0.05
CHRNA3P32297 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA3P32297 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA3P32297 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA3P32297 AC073862.5-201ENST00000624129 2027 ntBASIC14.76□□□□□ -0.05
CHRNA3P32297 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
CHRNA3P32297 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA3P32297 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.76□□□□□ -0.05
CHRNA3P32297 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA3P32297 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA3P32297 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
CHRNA3P32297 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC14.76□□□□□ -0.05
CHRNA3P32297 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC14.76□□□□□ -0.05
CHRNA3P32297 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA3P32297 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.75□□□□□ -0.05
CHRNA3P32297 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA3P32297 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
CHRNA3P32297 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA3P32297 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA3P32297 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA3P32297 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC14.75□□□□□ -0.05
CHRNA3P32297 AC008132.1-202ENST00000342005 1389 ntBASIC14.75□□□□□ -0.05
CHRNA3P32297 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC14.75□□□□□ -0.05
CHRNA3P32297 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA3P32297 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRNA3P32297 AC020917.4-201ENST00000623994 1999 ntBASIC14.75□□□□□ -0.05
CHRNA3P32297 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA3P32297 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA3P32297 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA3P32297 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRNA3P32297 CR383656.2-201ENST00000548656 2254 ntBASIC14.75□□□□□ -0.05
CHRNA3P32297 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA3P32297 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA3P32297 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.75□□□□□ -0.05
CHRNA3P32297 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA3P32297 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA3P32297 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRNA3P32297 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.75□□□□□ -0.05
CHRNA3P32297 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.75□□□□□ -0.05
CHRNA3P32297 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.75□□□□□ -0.05
CHRNA3P32297 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRNA3P32297 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA3P32297 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.75□□□□□ -0.05
CHRNA3P32297 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.75□□□□□ -0.05
CHRNA3P32297 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.75□□□□□ -0.05
CHRNA3P32297 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRNA3P32297 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.75□□□□□ -0.05
CHRNA3P32297 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRNA3P32297 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRNA3P32297 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA3P32297 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.75□□□□□ -0.05
CHRNA3P32297 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
CHRNA3P32297 AL591471.1-201ENST00000621855 229 ntBASIC14.75□□□□□ -0.05
CHRNA3P32297 CU633904.3-201ENST00000624042 1029 ntBASIC14.75□□□□□ -0.05
CHRNA3P32297 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.75□□□□□ -0.05
CHRNA3P32297 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.75□□□□□ -0.05
CHRNA3P32297 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA3P32297 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CHRNA3P32297 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CHRNA3P32297 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA3P32297 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRNA3P32297 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA3P32297 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRNA3P32297 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA3P32297 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA3P32297 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC14.75□□□□□ -0.05
CHRNA3P32297 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CHRNA3P32297 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA3P32297 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA3P32297 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms