Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
COL8A2P25067 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
COL8A2P25067 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
COL8A2P25067 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
COL8A2P25067 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC11.8□□□□□ -0.52
COL8A2P25067 ARHGAP23P1-201ENST00000562773 1937 ntBASIC11.8□□□□□ -0.52
COL8A2P25067 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
COL8A2P25067 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
COL8A2P25067 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC11.8□□□□□ -0.52
COL8A2P25067 AC092053.3-201ENST00000641308 4975 ntBASIC11.8□□□□□ -0.52
COL8A2P25067 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
COL8A2P25067 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
COL8A2P25067 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC11.8□□□□□ -0.52
COL8A2P25067 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
COL8A2P25067 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC11.8□□□□□ -0.52
COL8A2P25067 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
COL8A2P25067 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
COL8A2P25067 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
COL8A2P25067 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
COL8A2P25067 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC11.8□□□□□ -0.52
COL8A2P25067 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC11.8□□□□□ -0.52
COL8A2P25067 PIN4P1-201ENST00000451079 396 ntBASIC11.8□□□□□ -0.52
COL8A2P25067 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
COL8A2P25067 RN7SL375P-201ENST00000492442 298 ntBASIC11.8□□□□□ -0.52
COL8A2P25067 RN7SL767P-201ENST00000493013 295 ntBASIC11.8□□□□□ -0.52
COL8A2P25067 RPS23-204ENST00000507980 836 ntTSL 2 BASIC11.8□□□□□ -0.52
COL8A2P25067 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC11.8□□□□□ -0.52
COL8A2P25067 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC11.8□□□□□ -0.52
COL8A2P25067 SNORD3B-1-201ENST00000577988 758 ntBASIC11.8□□□□□ -0.52
COL8A2P25067 AC132825.4-202ENST00000578792 434 ntBASIC11.8□□□□□ -0.52
COL8A2P25067 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
COL8A2P25067 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC11.8□□□□□ -0.52
COL8A2P25067 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
COL8A2P25067 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC11.8□□□□□ -0.52
COL8A2P25067 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
COL8A2P25067 AL359091.4-201ENST00000610052 409 ntBASIC11.8□□□□□ -0.52
COL8A2P25067 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
COL8A2P25067 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
COL8A2P25067 AL132780.4-201ENST00000624870 1135 ntBASIC11.8□□□□□ -0.52
COL8A2P25067 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC11.8□□□□□ -0.52
COL8A2P25067 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
COL8A2P25067 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
COL8A2P25067 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
COL8A2P25067 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
COL8A2P25067 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
COL8A2P25067 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
COL8A2P25067 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
COL8A2P25067 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
COL8A2P25067 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
COL8A2P25067 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
COL8A2P25067 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
COL8A2P25067 AL157996.1-201ENST00000624684 2299 ntBASIC11.8□□□□□ -0.52
COL8A2P25067 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
COL8A2P25067 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC11.8□□□□□ -0.52
COL8A2P25067 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC11.8□□□□□ -0.52
COL8A2P25067 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
COL8A2P25067 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
COL8A2P25067 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC11.8□□□□□ -0.52
COL8A2P25067 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
COL8A2P25067 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
COL8A2P25067 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
COL8A2P25067 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
COL8A2P25067 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
COL8A2P25067 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC11.79□□□□□ -0.52
COL8A2P25067 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
COL8A2P25067 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
COL8A2P25067 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
COL8A2P25067 ODCP-201ENST00000459650 1639 ntBASIC11.79□□□□□ -0.52
COL8A2P25067 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
COL8A2P25067 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
COL8A2P25067 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
COL8A2P25067 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
COL8A2P25067 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC11.79□□□□□ -0.52
COL8A2P25067 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC11.79□□□□□ -0.52
COL8A2P25067 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
COL8A2P25067 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
COL8A2P25067 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
COL8A2P25067 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
COL8A2P25067 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC11.79□□□□□ -0.52
COL8A2P25067 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC11.79□□□□□ -0.52
COL8A2P25067 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
COL8A2P25067 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
COL8A2P25067 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
COL8A2P25067 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
COL8A2P25067 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC11.79□□□□□ -0.52
COL8A2P25067 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC11.79□□□□□ -0.52
COL8A2P25067 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC11.79□□□□□ -0.52
COL8A2P25067 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC11.79□□□□□ -0.52
COL8A2P25067 IGHV3-37-201ENST00000518544 340 ntBASIC11.79□□□□□ -0.52
COL8A2P25067 MBP-227ENST00000526111 581 ntTSL 4 BASIC11.79□□□□□ -0.52
COL8A2P25067 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC11.79□□□□□ -0.52
COL8A2P25067 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC11.79□□□□□ -0.52
COL8A2P25067 BAP1-211ENST00000615113 489 ntBASIC11.79□□□□□ -0.52
COL8A2P25067 AC105137.3-201ENST00000617588 984 ntBASIC11.79□□□□□ -0.52
COL8A2P25067 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
COL8A2P25067 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
COL8A2P25067 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC11.79□□□□□ -0.52
COL8A2P25067 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC11.79□□□□□ -0.52
COL8A2P25067 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC11.79□□□□□ -0.52
COL8A2P25067 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms