Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.03□□□□□ -0.32
PRKCAP17252 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PRKCAP17252 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PRKCAP17252 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.03□□□□□ -0.32
PRKCAP17252 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.03□□□□□ -0.32
PRKCAP17252 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.03□□□□□ -0.32
PRKCAP17252 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PRKCAP17252 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PRKCAP17252 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.03□□□□□ -0.32
PRKCAP17252 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PRKCAP17252 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PRKCAP17252 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PRKCAP17252 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PRKCAP17252 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PRKCAP17252 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PRKCAP17252 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.03□□□□□ -0.32
PRKCAP17252 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
PRKCAP17252 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.03□□□□□ -0.32
PRKCAP17252 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
PRKCAP17252 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
PRKCAP17252 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PRKCAP17252 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.03□□□□□ -0.32
PRKCAP17252 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
PRKCAP17252 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.03□□□□□ -0.32
PRKCAP17252 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.03□□□□□ -0.32
PRKCAP17252 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PRKCAP17252 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
PRKCAP17252 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PRKCAP17252 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PRKCAP17252 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.03□□□□□ -0.32
PRKCAP17252 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.03□□□□□ -0.32
PRKCAP17252 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
PRKCAP17252 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
PRKCAP17252 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
PRKCAP17252 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
PRKCAP17252 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.02□□□□□ -0.32
PRKCAP17252 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
PRKCAP17252 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
PRKCAP17252 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
PRKCAP17252 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
PRKCAP17252 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
PRKCAP17252 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PRKCAP17252 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.02□□□□□ -0.33
PRKCAP17252 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.02□□□□□ -0.33
PRKCAP17252 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PRKCAP17252 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PRKCAP17252 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
PRKCAP17252 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PRKCAP17252 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.02□□□□□ -0.33
PRKCAP17252 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PRKCAP17252 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PRKCAP17252 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.02□□□□□ -0.33
PRKCAP17252 ZNF767P-206ENST00000513792 565 ntBASIC13.02□□□□□ -0.33
PRKCAP17252 AL512310.5-201ENST00000551999 515 ntBASIC13.02□□□□□ -0.33
PRKCAP17252 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.02□□□□□ -0.33
PRKCAP17252 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.02□□□□□ -0.33
PRKCAP17252 AC026740.1-201ENST00000607068 791 ntBASIC13.02□□□□□ -0.33
PRKCAP17252 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.02□□□□□ -0.33
PRKCAP17252 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
PRKCAP17252 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PRKCAP17252 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC13.02□□□□□ -0.33
PRKCAP17252 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PRKCAP17252 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
PRKCAP17252 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PRKCAP17252 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.02□□□□□ -0.33
PRKCAP17252 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
PRKCAP17252 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
PRKCAP17252 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PRKCAP17252 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.02□□□□□ -0.33
PRKCAP17252 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PRKCAP17252 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.02□□□□□ -0.33
PRKCAP17252 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PRKCAP17252 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PRKCAP17252 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
PRKCAP17252 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PRKCAP17252 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.02□□□□□ -0.33
PRKCAP17252 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC13.02□□□□□ -0.33
PRKCAP17252 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.02□□□□□ -0.33
PRKCAP17252 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PRKCAP17252 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
PRKCAP17252 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 AC099521.2-201ENST00000619354 2036 ntBASIC13.01□□□□□ -0.33
PRKCAP17252 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.01□□□□□ -0.33
PRKCAP17252 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC13.01□□□□□ -0.33
PRKCAP17252 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
PRKCAP17252 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC13.01□□□□□ -0.33
PRKCAP17252 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.01□□□□□ -0.33
PRKCAP17252 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRKCAP17252 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.01□□□□□ -0.33
PRKCAP17252 RN7SKP214-201ENST00000364208 315 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms