Protein–RNA interactions for Protein: P12074

COX6A1, Cytochrome c oxidase subunit 6A1, mitochondrial, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1P12074 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC12.73□□□□□ -0.37
COX6A1P12074 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC12.73□□□□□ -0.37
COX6A1P12074 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC12.73□□□□□ -0.37
COX6A1P12074 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC12.73□□□□□ -0.37
COX6A1P12074 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC12.73□□□□□ -0.37
COX6A1P12074 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
COX6A1P12074 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COX6A1P12074 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
COX6A1P12074 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC12.73□□□□□ -0.37
COX6A1P12074 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.73□□□□□ -0.37
COX6A1P12074 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
COX6A1P12074 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COX6A1P12074 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COX6A1P12074 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COX6A1P12074 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.73□□□□□ -0.37
COX6A1P12074 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.73□□□□□ -0.37
COX6A1P12074 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
COX6A1P12074 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.73□□□□□ -0.37
COX6A1P12074 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.73□□□□□ -0.37
COX6A1P12074 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.73□□□□□ -0.37
COX6A1P12074 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.73□□□□□ -0.37
COX6A1P12074 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
COX6A1P12074 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.73□□□□□ -0.37
COX6A1P12074 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
COX6A1P12074 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
COX6A1P12074 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
COX6A1P12074 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.72□□□□□ -0.37
COX6A1P12074 AL928921.2-201ENST00000641325 2442 ntBASIC12.72□□□□□ -0.37
COX6A1P12074 GUCY2EP-203ENST00000531117 1918 ntBASIC12.72□□□□□ -0.37
COX6A1P12074 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COX6A1P12074 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COX6A1P12074 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COX6A1P12074 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COX6A1P12074 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.72□□□□□ -0.37
COX6A1P12074 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COX6A1P12074 KRT8P42-201ENST00000405771 1399 ntBASIC12.72□□□□□ -0.37
COX6A1P12074 FKBP4P8-201ENST00000610931 1369 ntBASIC12.72□□□□□ -0.37
COX6A1P12074 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
COX6A1P12074 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
COX6A1P12074 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
COX6A1P12074 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COX6A1P12074 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
COX6A1P12074 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COX6A1P12074 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COX6A1P12074 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COX6A1P12074 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COX6A1P12074 MIR1301-201ENST00000408518 82 ntBASIC12.72□□□□□ -0.37
COX6A1P12074 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
COX6A1P12074 KRT17P4-201ENST00000429445 819 ntBASIC12.72□□□□□ -0.37
COX6A1P12074 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC12.72□□□□□ -0.37
COX6A1P12074 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC12.72□□□□□ -0.37
COX6A1P12074 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
COX6A1P12074 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COX6A1P12074 AC104212.2-201ENST00000478813 628 ntBASIC12.72□□□□□ -0.37
COX6A1P12074 NSD1-211ENST00000511258 809 ntTSL 3 BASIC12.72□□□□□ -0.37
COX6A1P12074 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC12.72□□□□□ -0.37
COX6A1P12074 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC12.72□□□□□ -0.37
COX6A1P12074 FAM86B3P-203ENST00000523992 854 ntBASIC12.72□□□□□ -0.37
COX6A1P12074 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COX6A1P12074 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC12.72□□□□□ -0.37
COX6A1P12074 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC12.72□□□□□ -0.37
COX6A1P12074 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC12.72□□□□□ -0.37
COX6A1P12074 AL022344.2-201ENST00000568976 968 ntBASIC12.72□□□□□ -0.37
COX6A1P12074 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
COX6A1P12074 THY1-209ENST00000580275 578 ntTSL 3 BASIC12.72□□□□□ -0.37
COX6A1P12074 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC12.72□□□□□ -0.37
COX6A1P12074 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC12.72□□□□□ -0.37
COX6A1P12074 CYP4F36P-201ENST00000589193 186 ntBASIC12.72□□□□□ -0.37
COX6A1P12074 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC12.72□□□□□ -0.37
COX6A1P12074 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC12.72□□□□□ -0.37
COX6A1P12074 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COX6A1P12074 HMGB1P24-201ENST00000611897 328 ntBASIC12.72□□□□□ -0.37
COX6A1P12074 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC12.72□□□□□ -0.37
COX6A1P12074 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COX6A1P12074 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.72□□□□□ -0.37
COX6A1P12074 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
COX6A1P12074 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COX6A1P12074 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.72□□□□□ -0.37
COX6A1P12074 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
COX6A1P12074 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COX6A1P12074 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COX6A1P12074 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.72□□□□□ -0.37
COX6A1P12074 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
COX6A1P12074 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.72□□□□□ -0.37
COX6A1P12074 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.72□□□□□ -0.37
COX6A1P12074 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.72□□□□□ -0.37
COX6A1P12074 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COX6A1P12074 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COX6A1P12074 AC024075.2-201ENST00000598112 1473 ntBASIC12.72□□□□□ -0.37
COX6A1P12074 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
COX6A1P12074 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.71□□□□□ -0.37
COX6A1P12074 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COX6A1P12074 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC12.71□□□□□ -0.37
COX6A1P12074 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
COX6A1P12074 AC011474.4-201ENST00000623523 2076 ntBASIC12.71□□□□□ -0.37
COX6A1P12074 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.71□□□□□ -0.37
COX6A1P12074 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
COX6A1P12074 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COX6A1P12074 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COX6A1P12074 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms