Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.71■□□□□ 0.11
TPM3P06753 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.71■□□□□ 0.11
TPM3P06753 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.71■□□□□ 0.11
TPM3P06753 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.71■□□□□ 0.11
TPM3P06753 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.71■□□□□ 0.11
TPM3P06753 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TPM3P06753 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.71■□□□□ 0.11
TPM3P06753 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.71■□□□□ 0.11
TPM3P06753 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.71■□□□□ 0.11
TPM3P06753 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.71■□□□□ 0.11
TPM3P06753 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.71■□□□□ 0.11
TPM3P06753 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TPM3P06753 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TPM3P06753 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TPM3P06753 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TPM3P06753 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TPM3P06753 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.71■□□□□ 0.1
TPM3P06753 PCDHB17P-202ENST00000623466 3066 ntBASIC15.71■□□□□ 0.1
TPM3P06753 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TPM3P06753 AC007952.5-201ENST00000572818 1486 ntBASIC15.71■□□□□ 0.1
TPM3P06753 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPM3P06753 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC15.7■□□□□ 0.1
TPM3P06753 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TPM3P06753 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC15.7■□□□□ 0.1
TPM3P06753 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPM3P06753 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPM3P06753 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC15.7■□□□□ 0.1
TPM3P06753 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPM3P06753 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TPM3P06753 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC15.7■□□□□ 0.1
TPM3P06753 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TPM3P06753 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
TPM3P06753 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPM3P06753 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TPM3P06753 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TPM3P06753 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.7■□□□□ 0.1
TPM3P06753 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TPM3P06753 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPM3P06753 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TPM3P06753 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC15.7■□□□□ 0.1
TPM3P06753 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TPM3P06753 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TPM3P06753 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPM3P06753 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.7■□□□□ 0.1
TPM3P06753 AC010141.1-201ENST00000411585 623 ntBASIC15.7■□□□□ 0.1
TPM3P06753 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.7■□□□□ 0.1
TPM3P06753 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPM3P06753 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.7■□□□□ 0.1
TPM3P06753 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.7■□□□□ 0.1
TPM3P06753 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.7■□□□□ 0.1
TPM3P06753 AC140912.1-201ENST00000577171 1054 ntBASIC15.7■□□□□ 0.1
TPM3P06753 MIR5189-201ENST00000577370 114 ntBASIC15.7■□□□□ 0.1
TPM3P06753 RN7SL713P-201ENST00000582127 302 ntBASIC15.7■□□□□ 0.1
TPM3P06753 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
TPM3P06753 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.7■□□□□ 0.1
TPM3P06753 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TPM3P06753 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC15.7■□□□□ 0.1
TPM3P06753 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TPM3P06753 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPM3P06753 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPM3P06753 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC15.7■□□□□ 0.1
TPM3P06753 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TPM3P06753 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPM3P06753 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPM3P06753 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TPM3P06753 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TPM3P06753 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPM3P06753 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPM3P06753 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TPM3P06753 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TPM3P06753 CCT8L1P-201ENST00000465400 1674 ntBASIC15.7■□□□□ 0.1
TPM3P06753 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPM3P06753 ZNF493-208ENST00000599461 1769 ntBASIC15.7■□□□□ 0.1
TPM3P06753 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPM3P06753 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.69■□□□□ 0.1
TPM3P06753 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TPM3P06753 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPM3P06753 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPM3P06753 AL354989.2-201ENST00000435838 1540 ntBASIC15.69■□□□□ 0.1
TPM3P06753 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TPM3P06753 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TPM3P06753 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPM3P06753 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TPM3P06753 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPM3P06753 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPM3P06753 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPM3P06753 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPM3P06753 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPM3P06753 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPM3P06753 AC103592.1-201ENST00000394513 664 ntBASIC15.69■□□□□ 0.1
TPM3P06753 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.69■□□□□ 0.1
TPM3P06753 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TPM3P06753 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TPM3P06753 SSR4P1-201ENST00000415143 412 ntBASIC15.69■□□□□ 0.1
TPM3P06753 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPM3P06753 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.69■□□□□ 0.1
TPM3P06753 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.69■□□□□ 0.1
TPM3P06753 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.69■□□□□ 0.1
TPM3P06753 API5-211ENST00000534695 560 ntTSL 5 BASIC15.69■□□□□ 0.1
TPM3P06753 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms