Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DOAP06340 AP005212.2-201ENST00000584979 510 ntBASIC16.32■□□□□ 0.2
HLA-DOAP06340 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HLA-DOAP06340 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DOAP06340 AC073869.4-201ENST00000620841 800 ntBASIC16.32■□□□□ 0.2
HLA-DOAP06340 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-DOAP06340 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
HLA-DOAP06340 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DOAP06340 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DOAP06340 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DOAP06340 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DOAP06340 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DOAP06340 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DOAP06340 AC089987.1-201ENST00000551654 2209 ntBASIC16.31■□□□□ 0.2
HLA-DOAP06340 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DOAP06340 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DOAP06340 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC16.31■□□□□ 0.2
HLA-DOAP06340 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HLA-DOAP06340 SALL4P6-201ENST00000429385 1691 ntBASIC16.31■□□□□ 0.2
HLA-DOAP06340 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DOAP06340 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DOAP06340 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DOAP06340 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HLA-DOAP06340 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC16.31■□□□□ 0.2
HLA-DOAP06340 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DOAP06340 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DOAP06340 RPL10-203ENST00000406022 748 ntTSL 3 BASIC16.31■□□□□ 0.2
HLA-DOAP06340 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DOAP06340 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DOAP06340 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
HLA-DOAP06340 AC010234.1-201ENST00000494599 870 ntBASIC16.31■□□□□ 0.2
HLA-DOAP06340 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC16.31■□□□□ 0.2
HLA-DOAP06340 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC16.31■□□□□ 0.2
HLA-DOAP06340 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DOAP06340 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC16.31■□□□□ 0.2
HLA-DOAP06340 KRT18P8-201ENST00000581937 1246 ntBASIC16.31■□□□□ 0.2
HLA-DOAP06340 HKR1-225ENST00000592168 566 ntTSL 4 BASIC16.31■□□□□ 0.2
HLA-DOAP06340 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DOAP06340 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC16.31■□□□□ 0.2
HLA-DOAP06340 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DOAP06340 PEBP1P2-201ENST00000603980 558 ntBASIC16.31■□□□□ 0.2
HLA-DOAP06340 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DOAP06340 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DOAP06340 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DOAP06340 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DOAP06340 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DOAP06340 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DOAP06340 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HLA-DOAP06340 AC007191.1-201ENST00000623179 2995 ntBASIC16.31■□□□□ 0.2
HLA-DOAP06340 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DOAP06340 AC020763.3-201ENST00000625095 2904 ntBASIC16.31■□□□□ 0.2
HLA-DOAP06340 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.31■□□□□ 0.2
HLA-DOAP06340 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DOAP06340 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DOAP06340 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DOAP06340 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DOAP06340 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DOAP06340 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DOAP06340 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DOAP06340 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DOAP06340 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DOAP06340 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC16.3■□□□□ 0.2
HLA-DOAP06340 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DOAP06340 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DOAP06340 FKBP4P8-201ENST00000610931 1369 ntBASIC16.3■□□□□ 0.2
HLA-DOAP06340 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DOAP06340 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DOAP06340 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DOAP06340 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DOAP06340 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DOAP06340 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HLA-DOAP06340 U3.5-201ENST00000363448 216 ntBASIC16.3■□□□□ 0.2
HLA-DOAP06340 RHOC-205ENST00000369636 786 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DOAP06340 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HLA-DOAP06340 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DOAP06340 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DOAP06340 SNU13-204ENST00000402458 462 ntTSL 3 BASIC16.3■□□□□ 0.2
HLA-DOAP06340 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC16.3■□□□□ 0.2
HLA-DOAP06340 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC16.3■□□□□ 0.2
HLA-DOAP06340 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC16.3■□□□□ 0.2
HLA-DOAP06340 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC16.3■□□□□ 0.2
HLA-DOAP06340 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HLA-DOAP06340 AC092903.1-201ENST00000466506 262 ntBASIC16.3■□□□□ 0.2
HLA-DOAP06340 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DOAP06340 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC16.3■□□□□ 0.2
HLA-DOAP06340 CYP4F36P-201ENST00000589193 186 ntBASIC16.3■□□□□ 0.2
HLA-DOAP06340 TYMSP2-201ENST00000589501 424 ntBASIC16.3■□□□□ 0.2
HLA-DOAP06340 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC16.3■□□□□ 0.2
HLA-DOAP06340 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HLA-DOAP06340 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC16.3■□□□□ 0.2
HLA-DOAP06340 AC027601.5-201ENST00000624065 2482 ntBASIC16.3■□□□□ 0.2
HLA-DOAP06340 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC16.3■□□□□ 0.2
HLA-DOAP06340 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DOAP06340 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.3■□□□□ 0.2
HLA-DOAP06340 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DOAP06340 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DOAP06340 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
HLA-DOAP06340 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DOAP06340 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HLA-DOAP06340 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms