Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV3P03979 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC11.05□□□□□ -0.64
TRGV3P03979 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV3P03979 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV3P03979 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC11.04□□□□□ -0.64
TRGV3P03979 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC11.04□□□□□ -0.64
TRGV3P03979 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC11.04□□□□□ -0.64
TRGV3P03979 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC11.04□□□□□ -0.64
TRGV3P03979 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC11.04□□□□□ -0.64
TRGV3P03979 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV3P03979 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV3P03979 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
TRGV3P03979 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV3P03979 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
TRGV3P03979 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
TRGV3P03979 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC11.04□□□□□ -0.64
TRGV3P03979 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV3P03979 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV3P03979 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV3P03979 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV3P03979 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV3P03979 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV3P03979 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC11.04□□□□□ -0.64
TRGV3P03979 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV3P03979 PDIA3P2-201ENST00000428073 158 ntBASIC11.04□□□□□ -0.64
TRGV3P03979 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC11.04□□□□□ -0.64
TRGV3P03979 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC11.04□□□□□ -0.64
TRGV3P03979 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC11.04□□□□□ -0.64
TRGV3P03979 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC11.04□□□□□ -0.64
TRGV3P03979 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
TRGV3P03979 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC11.04□□□□□ -0.64
TRGV3P03979 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
TRGV3P03979 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC11.04□□□□□ -0.64
TRGV3P03979 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC11.04□□□□□ -0.64
TRGV3P03979 MIR3619-201ENST00000579667 83 ntBASIC11.04□□□□□ -0.64
TRGV3P03979 NAT9-220ENST00000582870 896 ntTSL 5 BASIC11.04□□□□□ -0.64
TRGV3P03979 CENPX-208ENST00000584347 799 ntTSL 2 BASIC11.04□□□□□ -0.64
TRGV3P03979 HPN-206ENST00000597419 1212 ntTSL 5 BASIC11.04□□□□□ -0.64
TRGV3P03979 AL021707.6-201ENST00000609212 491 ntBASIC11.04□□□□□ -0.64
TRGV3P03979 MEG3_2.1-201ENST00000611456 105 ntBASIC11.04□□□□□ -0.64
TRGV3P03979 AC138627.1-207ENST00000641560 1006 ntBASIC11.04□□□□□ -0.64
TRGV3P03979 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC11.04□□□□□ -0.64
TRGV3P03979 AC068760.1-201ENST00000493579 1953 ntBASIC11.04□□□□□ -0.64
TRGV3P03979 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV3P03979 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV3P03979 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC11.04□□□□□ -0.64
TRGV3P03979 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
TRGV3P03979 RCC2P1-201ENST00000452257 1476 ntBASIC11.04□□□□□ -0.64
TRGV3P03979 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV3P03979 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV3P03979 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV3P03979 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC11.04□□□□□ -0.64
TRGV3P03979 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV3P03979 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
TRGV3P03979 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV3P03979 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC11.04□□□□□ -0.64
TRGV3P03979 AGAP10P-201ENST00000454844 2418 ntBASIC11.04□□□□□ -0.64
TRGV3P03979 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV3P03979 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC11.04□□□□□ -0.64
TRGV3P03979 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV3P03979 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
TRGV3P03979 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
TRGV3P03979 FAM90A2P-201ENST00000511144 1395 ntBASIC11.03□□□□□ -0.64
TRGV3P03979 FAM90A25P-201ENST00000528404 1395 ntBASIC11.03□□□□□ -0.64
TRGV3P03979 AC130686.1-201ENST00000622936 2466 ntBASIC11.03□□□□□ -0.64
TRGV3P03979 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
TRGV3P03979 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
TRGV3P03979 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
TRGV3P03979 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
TRGV3P03979 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
TRGV3P03979 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC11.03□□□□□ -0.64
TRGV3P03979 AL583805.1-201ENST00000391389 531 ntBASIC11.03□□□□□ -0.64
TRGV3P03979 BX679664.3-201ENST00000414070 555 ntBASIC11.03□□□□□ -0.64
TRGV3P03979 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC11.03□□□□□ -0.64
TRGV3P03979 NAGK-204ENST00000443872 878 ntTSL 3 BASIC11.03□□□□□ -0.64
TRGV3P03979 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC11.03□□□□□ -0.64
TRGV3P03979 AC113935.1-201ENST00000471722 555 ntBASIC11.03□□□□□ -0.64
TRGV3P03979 RN7SL258P-201ENST00000478664 300 ntBASIC11.03□□□□□ -0.64
TRGV3P03979 AC005740.1-201ENST00000515639 522 ntBASIC11.03□□□□□ -0.64
TRGV3P03979 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC11.03□□□□□ -0.64
TRGV3P03979 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC11.03□□□□□ -0.64
TRGV3P03979 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRGV3P03979 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms