Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AC010503.4-201ENST00000615487 688 ntBASIC11.06□□□□□ -0.64
IFNA1P01562 TEX28P2-201ENST00000617764 1221 ntBASIC11.06□□□□□ -0.64
IFNA1P01562 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
IFNA1P01562 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
IFNA1P01562 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
IFNA1P01562 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
IFNA1P01562 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC11.06□□□□□ -0.64
IFNA1P01562 SLIT2-201ENST00000273739 5132 ntTSL 5 BASIC11.06□□□□□ -0.64
IFNA1P01562 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
IFNA1P01562 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC11.06□□□□□ -0.64
IFNA1P01562 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
IFNA1P01562 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
IFNA1P01562 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
IFNA1P01562 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
IFNA1P01562 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
IFNA1P01562 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
IFNA1P01562 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
IFNA1P01562 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
IFNA1P01562 PAX6-245ENST00000638914 7300 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
IFNA1P01562 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
IFNA1P01562 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC11.05□□□□□ -0.64
IFNA1P01562 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC11.05□□□□□ -0.64
IFNA1P01562 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
IFNA1P01562 RAB8B-201ENST00000321437 4943 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC11.05□□□□□ -0.64
IFNA1P01562 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
IFNA1P01562 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 PTGER3-206ENST00000370924 6982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 YPEL2-201ENST00000312655 5217 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
IFNA1P01562 FOSL2-202ENST00000379619 5829 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 CAMK4-201ENST00000282356 12240 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 LCMT2-201ENST00000305641 6957 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
IFNA1P01562 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 TEX30-203ENST00000376022 828 ntTSL 2 BASIC11.05□□□□□ -0.64
IFNA1P01562 TEX30-205ENST00000376029 959 ntTSL 2 BASIC11.05□□□□□ -0.64
IFNA1P01562 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC11.05□□□□□ -0.64
IFNA1P01562 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC11.05□□□□□ -0.64
IFNA1P01562 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC11.05□□□□□ -0.64
IFNA1P01562 AL512310.5-201ENST00000551999 515 ntBASIC11.05□□□□□ -0.64
IFNA1P01562 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC11.05□□□□□ -0.64
IFNA1P01562 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC11.05□□□□□ -0.64
IFNA1P01562 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC11.05□□□□□ -0.64
IFNA1P01562 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC11.05□□□□□ -0.64
IFNA1P01562 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC11.05□□□□□ -0.64
IFNA1P01562 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC11.05□□□□□ -0.64
IFNA1P01562 C20orf181-201ENST00000623918 480 ntBASIC11.05□□□□□ -0.64
IFNA1P01562 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC11.05□□□□□ -0.64
IFNA1P01562 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC11.05□□□□□ -0.64
IFNA1P01562 RAB34-224ENST00000636513 888 ntTSL 5 BASIC11.05□□□□□ -0.64
IFNA1P01562 PCDHGA7-201ENST00000518325 4605 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
IFNA1P01562 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
IFNA1P01562 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 BICRAL-203ENST00000614467 6510 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
IFNA1P01562 AC008040.5-201ENST00000599781 1781 ntBASIC11.05□□□□□ -0.64
IFNA1P01562 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC11.05□□□□□ -0.64
IFNA1P01562 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC11.05□□□□□ -0.64
IFNA1P01562 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 ARHGAP12-205ENST00000396144 5084 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IFNA1P01562 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC11.05□□□□□ -0.64
IFNA1P01562 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
IFNA1P01562 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
IFNA1P01562 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
IFNA1P01562 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
IFNA1P01562 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IFNA1P01562 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC11.04□□□□□ -0.64
IFNA1P01562 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IFNA1P01562 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC11.04□□□□□ -0.64
IFNA1P01562 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
IFNA1P01562 AL391294.1-201ENST00000641352 4068 ntBASIC11.04□□□□□ -0.64
IFNA1P01562 FLNB-204ENST00000429972 9430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms