Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA9Q9Y5H5 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA9Q9Y5H5 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
PCDHA9Q9Y5H5 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA9Q9Y5H5 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA9Q9Y5H5 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA9Q9Y5H5 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHA9Q9Y5H5 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PCDHA9Q9Y5H5 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHA9Q9Y5H5 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHA9Q9Y5H5 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHA9Q9Y5H5 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHA9Q9Y5H5 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHA9Q9Y5H5 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHA9Q9Y5H5 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHA9Q9Y5H5 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHA9Q9Y5H5 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHA9Q9Y5H5 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHA9Q9Y5H5 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHA9Q9Y5H5 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHA9Q9Y5H5 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHA9Q9Y5H5 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
PCDHA9Q9Y5H5 AC127496.7-201ENST00000625110 1798 ntBASIC21.54■■□□□ 1.04
PCDHA9Q9Y5H5 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDHA9Q9Y5H5 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDHA9Q9Y5H5 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHA9Q9Y5H5 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDHA9Q9Y5H5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDHA9Q9Y5H5 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.54■■□□□ 1.04
PCDHA9Q9Y5H5 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDHA9Q9Y5H5 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.54■■□□□ 1.04
PCDHA9Q9Y5H5 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
PCDHA9Q9Y5H5 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHA9Q9Y5H5 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
PCDHA9Q9Y5H5 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHA9Q9Y5H5 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PCDHA9Q9Y5H5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHA9Q9Y5H5 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
PCDHA9Q9Y5H5 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHA9Q9Y5H5 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PCDHA9Q9Y5H5 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHA9Q9Y5H5 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PCDHA9Q9Y5H5 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PCDHA9Q9Y5H5 Z92544.1-202ENST00000571933 1220 ntBASIC21.53■■□□□ 1.04
PCDHA9Q9Y5H5 AL451085.2-201ENST00000605085 799 ntBASIC21.53■■□□□ 1.04
PCDHA9Q9Y5H5 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHA9Q9Y5H5 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHA9Q9Y5H5 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHA9Q9Y5H5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHA9Q9Y5H5 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHA9Q9Y5H5 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.52■■□□□ 1.04
PCDHA9Q9Y5H5 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHA9Q9Y5H5 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.52■■□□□ 1.04
PCDHA9Q9Y5H5 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHA9Q9Y5H5 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHA9Q9Y5H5 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHA9Q9Y5H5 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHA9Q9Y5H5 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.52■■□□□ 1.04
PCDHA9Q9Y5H5 AC009299.2-201ENST00000482477 511 ntBASIC21.52■■□□□ 1.04
PCDHA9Q9Y5H5 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
PCDHA9Q9Y5H5 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHA9Q9Y5H5 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHA9Q9Y5H5 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHA9Q9Y5H5 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHA9Q9Y5H5 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PCDHA9Q9Y5H5 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.03
PCDHA9Q9Y5H5 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHA9Q9Y5H5 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PCDHA9Q9Y5H5 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDHA9Q9Y5H5 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
PCDHA9Q9Y5H5 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHA9Q9Y5H5 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHA9Q9Y5H5 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHA9Q9Y5H5 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHA9Q9Y5H5 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHA9Q9Y5H5 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDHA9Q9Y5H5 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHA9Q9Y5H5 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHA9Q9Y5H5 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHA9Q9Y5H5 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHA9Q9Y5H5 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PCDHA9Q9Y5H5 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.5■■□□□ 1.03
PCDHA9Q9Y5H5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDHA9Q9Y5H5 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHA9Q9Y5H5 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
PCDHA9Q9Y5H5 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHA9Q9Y5H5 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHA9Q9Y5H5 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHA9Q9Y5H5 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHA9Q9Y5H5 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHA9Q9Y5H5 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
PCDHA9Q9Y5H5 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHA9Q9Y5H5 KRT125P-201ENST00000546827 989 ntBASIC21.49■■□□□ 1.03
PCDHA9Q9Y5H5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHA9Q9Y5H5 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
PCDHA9Q9Y5H5 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHA9Q9Y5H5 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHA9Q9Y5H5 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHA9Q9Y5H5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHA9Q9Y5H5 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms