Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHB13Q9Y5F0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHB13Q9Y5F0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHB13Q9Y5F0 NFE2L3P1-201ENST00000588207 1959 ntBASIC24.71■■□□□ 1.55
PCDHB13Q9Y5F0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
PCDHB13Q9Y5F0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHB13Q9Y5F0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.7■■□□□ 1.54
PCDHB13Q9Y5F0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHB13Q9Y5F0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHB13Q9Y5F0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.7■■□□□ 1.54
PCDHB13Q9Y5F0 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.7■■□□□ 1.54
PCDHB13Q9Y5F0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.7■■□□□ 1.54
PCDHB13Q9Y5F0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHB13Q9Y5F0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHB13Q9Y5F0 C17orf82-201ENST00000623772 1530 ntBASIC24.7■■□□□ 1.54
PCDHB13Q9Y5F0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHB13Q9Y5F0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHB13Q9Y5F0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC24.7■■□□□ 1.54
PCDHB13Q9Y5F0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.69■■□□□ 1.54
PCDHB13Q9Y5F0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
PCDHB13Q9Y5F0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHB13Q9Y5F0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHB13Q9Y5F0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.69■■□□□ 1.54
PCDHB13Q9Y5F0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHB13Q9Y5F0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHB13Q9Y5F0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.69■■□□□ 1.54
PCDHB13Q9Y5F0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.69■■□□□ 1.54
PCDHB13Q9Y5F0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHB13Q9Y5F0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHB13Q9Y5F0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHB13Q9Y5F0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.68■■□□□ 1.54
PCDHB13Q9Y5F0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHB13Q9Y5F0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHB13Q9Y5F0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHB13Q9Y5F0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHB13Q9Y5F0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHB13Q9Y5F0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHB13Q9Y5F0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC24.67■■□□□ 1.54
PCDHB13Q9Y5F0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDHB13Q9Y5F0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.67■■□□□ 1.54
PCDHB13Q9Y5F0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHB13Q9Y5F0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.67■■□□□ 1.54
PCDHB13Q9Y5F0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHB13Q9Y5F0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHB13Q9Y5F0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHB13Q9Y5F0 DUSP8P3-201ENST00000399571 1760 ntBASIC24.66■■□□□ 1.54
PCDHB13Q9Y5F0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC24.66■■□□□ 1.54
PCDHB13Q9Y5F0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHB13Q9Y5F0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHB13Q9Y5F0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.65■■□□□ 1.54
PCDHB13Q9Y5F0 AL353803.4-201ENST00000565882 1934 ntBASIC24.65■■□□□ 1.54
PCDHB13Q9Y5F0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.65■■□□□ 1.54
PCDHB13Q9Y5F0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.65■■□□□ 1.54
PCDHB13Q9Y5F0 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.65■■□□□ 1.54
PCDHB13Q9Y5F0 LINC01529-204ENST00000636474 1715 ntBASIC24.65■■□□□ 1.54
PCDHB13Q9Y5F0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
PCDHB13Q9Y5F0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.65■■□□□ 1.54
PCDHB13Q9Y5F0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.65■■□□□ 1.54
PCDHB13Q9Y5F0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHB13Q9Y5F0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHB13Q9Y5F0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHB13Q9Y5F0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.64■■□□□ 1.54
PCDHB13Q9Y5F0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
PCDHB13Q9Y5F0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.64■■□□□ 1.54
PCDHB13Q9Y5F0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHB13Q9Y5F0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.64■■□□□ 1.54
PCDHB13Q9Y5F0 AL512631.2-201ENST00000604634 923 ntBASIC24.64■■□□□ 1.54
PCDHB13Q9Y5F0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHB13Q9Y5F0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.64■■□□□ 1.53
PCDHB13Q9Y5F0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
PCDHB13Q9Y5F0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.53
PCDHB13Q9Y5F0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC24.64■■□□□ 1.53
PCDHB13Q9Y5F0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.63■■□□□ 1.53
PCDHB13Q9Y5F0 C9orf163-202ENST00000624034 2573 ntBASIC24.63■■□□□ 1.53
PCDHB13Q9Y5F0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.63■■□□□ 1.53
PCDHB13Q9Y5F0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.63■■□□□ 1.53
PCDHB13Q9Y5F0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHB13Q9Y5F0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.63■■□□□ 1.53
PCDHB13Q9Y5F0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.63■■□□□ 1.53
PCDHB13Q9Y5F0 AC131212.1-201ENST00000613771 668 ntBASIC24.63■■□□□ 1.53
PCDHB13Q9Y5F0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.63■■□□□ 1.53
PCDHB13Q9Y5F0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHB13Q9Y5F0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC24.63■■□□□ 1.53
PCDHB13Q9Y5F0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHB13Q9Y5F0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.63■■□□□ 1.53
PCDHB13Q9Y5F0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
PCDHB13Q9Y5F0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHB13Q9Y5F0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHB13Q9Y5F0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.62■■□□□ 1.53
PCDHB13Q9Y5F0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHB13Q9Y5F0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.62■■□□□ 1.53
PCDHB13Q9Y5F0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHB13Q9Y5F0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHB13Q9Y5F0 DUX4L4-201ENST00000566884 1269 ntBASIC24.62■■□□□ 1.53
PCDHB13Q9Y5F0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.62■■□□□ 1.53
PCDHB13Q9Y5F0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.62■■□□□ 1.53
PCDHB13Q9Y5F0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHB13Q9Y5F0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHB13Q9Y5F0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHB13Q9Y5F0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms