Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
POLR1DQ9Y2S0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
POLR1DQ9Y2S0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
POLR1DQ9Y2S0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
POLR1DQ9Y2S0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
POLR1DQ9Y2S0 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.92■□□□□ 0.78
POLR1DQ9Y2S0 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.92■□□□□ 0.78
POLR1DQ9Y2S0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
POLR1DQ9Y2S0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
POLR1DQ9Y2S0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.92■□□□□ 0.78
POLR1DQ9Y2S0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
POLR1DQ9Y2S0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
POLR1DQ9Y2S0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
POLR1DQ9Y2S0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.91■□□□□ 0.78
POLR1DQ9Y2S0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
POLR1DQ9Y2S0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
POLR1DQ9Y2S0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.91■□□□□ 0.78
POLR1DQ9Y2S0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.91■□□□□ 0.78
POLR1DQ9Y2S0 KRT125P-201ENST00000546827 989 ntBASIC19.91■□□□□ 0.78
POLR1DQ9Y2S0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
POLR1DQ9Y2S0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.91■□□□□ 0.78
POLR1DQ9Y2S0 C9orf163-202ENST00000624034 2573 ntBASIC19.9■□□□□ 0.78
POLR1DQ9Y2S0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1DQ9Y2S0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1DQ9Y2S0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1DQ9Y2S0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1DQ9Y2S0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1DQ9Y2S0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1DQ9Y2S0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1DQ9Y2S0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1DQ9Y2S0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.9■□□□□ 0.78
POLR1DQ9Y2S0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1DQ9Y2S0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
POLR1DQ9Y2S0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1DQ9Y2S0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
POLR1DQ9Y2S0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1DQ9Y2S0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1DQ9Y2S0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1DQ9Y2S0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLR1DQ9Y2S0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
POLR1DQ9Y2S0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
POLR1DQ9Y2S0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
POLR1DQ9Y2S0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
POLR1DQ9Y2S0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
POLR1DQ9Y2S0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.89■□□□□ 0.77
POLR1DQ9Y2S0 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.89■□□□□ 0.77
POLR1DQ9Y2S0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.89■□□□□ 0.77
POLR1DQ9Y2S0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
POLR1DQ9Y2S0 RARRES2P1-201ENST00000474487 481 ntBASIC19.89■□□□□ 0.77
POLR1DQ9Y2S0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.89■□□□□ 0.77
POLR1DQ9Y2S0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.89■□□□□ 0.77
POLR1DQ9Y2S0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.89■□□□□ 0.77
POLR1DQ9Y2S0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
POLR1DQ9Y2S0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
POLR1DQ9Y2S0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.88■□□□□ 0.77
POLR1DQ9Y2S0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.88■□□□□ 0.77
POLR1DQ9Y2S0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
POLR1DQ9Y2S0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.88■□□□□ 0.77
POLR1DQ9Y2S0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.88■□□□□ 0.77
POLR1DQ9Y2S0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR1DQ9Y2S0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR1DQ9Y2S0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
POLR1DQ9Y2S0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
POLR1DQ9Y2S0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.88■□□□□ 0.77
POLR1DQ9Y2S0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
POLR1DQ9Y2S0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
POLR1DQ9Y2S0 AC012676.1-201ENST00000574705 1949 ntBASIC19.88■□□□□ 0.77
POLR1DQ9Y2S0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR1DQ9Y2S0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.88■□□□□ 0.77
POLR1DQ9Y2S0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR1DQ9Y2S0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1DQ9Y2S0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
POLR1DQ9Y2S0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1DQ9Y2S0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.87■□□□□ 0.77
POLR1DQ9Y2S0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1DQ9Y2S0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1DQ9Y2S0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1DQ9Y2S0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.87■□□□□ 0.77
POLR1DQ9Y2S0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.87■□□□□ 0.77
POLR1DQ9Y2S0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
POLR1DQ9Y2S0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1DQ9Y2S0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
POLR1DQ9Y2S0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.87■□□□□ 0.77
POLR1DQ9Y2S0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1DQ9Y2S0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1DQ9Y2S0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1DQ9Y2S0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
POLR1DQ9Y2S0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
POLR1DQ9Y2S0 AC021242.3-201ENST00000607598 1377 ntBASIC19.86■□□□□ 0.77
POLR1DQ9Y2S0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
POLR1DQ9Y2S0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR1DQ9Y2S0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
POLR1DQ9Y2S0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
POLR1DQ9Y2S0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR1DQ9Y2S0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.86■□□□□ 0.77
POLR1DQ9Y2S0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.86■□□□□ 0.77
POLR1DQ9Y2S0 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR1DQ9Y2S0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
POLR1DQ9Y2S0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.86■□□□□ 0.77
POLR1DQ9Y2S0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms