Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ERGIC3Q9Y282 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ERGIC3Q9Y282 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ERGIC3Q9Y282 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ERGIC3Q9Y282 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.38■□□□□ 0.85
ERGIC3Q9Y282 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.38■□□□□ 0.85
ERGIC3Q9Y282 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ERGIC3Q9Y282 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ERGIC3Q9Y282 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.38■□□□□ 0.85
ERGIC3Q9Y282 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ERGIC3Q9Y282 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
ERGIC3Q9Y282 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERGIC3Q9Y282 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERGIC3Q9Y282 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
ERGIC3Q9Y282 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERGIC3Q9Y282 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
ERGIC3Q9Y282 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ERGIC3Q9Y282 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERGIC3Q9Y282 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.37■□□□□ 0.85
ERGIC3Q9Y282 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERGIC3Q9Y282 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.36■□□□□ 0.85
ERGIC3Q9Y282 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.36■□□□□ 0.85
ERGIC3Q9Y282 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ERGIC3Q9Y282 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.36■□□□□ 0.85
ERGIC3Q9Y282 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.36■□□□□ 0.85
ERGIC3Q9Y282 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
ERGIC3Q9Y282 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.36■□□□□ 0.85
ERGIC3Q9Y282 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.36■□□□□ 0.85
ERGIC3Q9Y282 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
ERGIC3Q9Y282 AC242852.2-201ENST00000615738 1807 ntBASIC20.36■□□□□ 0.85
ERGIC3Q9Y282 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.36■□□□□ 0.85
ERGIC3Q9Y282 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ERGIC3Q9Y282 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.35■□□□□ 0.85
ERGIC3Q9Y282 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ERGIC3Q9Y282 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
ERGIC3Q9Y282 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
ERGIC3Q9Y282 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERGIC3Q9Y282 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERGIC3Q9Y282 AC093536.1-201ENST00000569153 554 ntBASIC20.35■□□□□ 0.85
ERGIC3Q9Y282 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.35■□□□□ 0.85
ERGIC3Q9Y282 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERGIC3Q9Y282 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERGIC3Q9Y282 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
ERGIC3Q9Y282 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERGIC3Q9Y282 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERGIC3Q9Y282 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.34■□□□□ 0.85
ERGIC3Q9Y282 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERGIC3Q9Y282 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERGIC3Q9Y282 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ERGIC3Q9Y282 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.34■□□□□ 0.85
ERGIC3Q9Y282 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.34■□□□□ 0.85
ERGIC3Q9Y282 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.34■□□□□ 0.85
ERGIC3Q9Y282 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERGIC3Q9Y282 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.34■□□□□ 0.85
ERGIC3Q9Y282 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERGIC3Q9Y282 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERGIC3Q9Y282 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERGIC3Q9Y282 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERGIC3Q9Y282 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.33■□□□□ 0.85
ERGIC3Q9Y282 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.33■□□□□ 0.84
ERGIC3Q9Y282 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.33■□□□□ 0.84
ERGIC3Q9Y282 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.84
ERGIC3Q9Y282 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ERGIC3Q9Y282 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.33■□□□□ 0.84
ERGIC3Q9Y282 ESRRAP2-201ENST00000418437 1549 ntBASIC20.32■□□□□ 0.84
ERGIC3Q9Y282 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERGIC3Q9Y282 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERGIC3Q9Y282 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ERGIC3Q9Y282 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.32■□□□□ 0.84
ERGIC3Q9Y282 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.32■□□□□ 0.84
ERGIC3Q9Y282 AC092296.2-201ENST00000589470 999 ntBASIC20.32■□□□□ 0.84
ERGIC3Q9Y282 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.32■□□□□ 0.84
ERGIC3Q9Y282 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.32■□□□□ 0.84
ERGIC3Q9Y282 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERGIC3Q9Y282 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERGIC3Q9Y282 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERGIC3Q9Y282 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERGIC3Q9Y282 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERGIC3Q9Y282 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.31■□□□□ 0.84
ERGIC3Q9Y282 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ERGIC3Q9Y282 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
ERGIC3Q9Y282 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERGIC3Q9Y282 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERGIC3Q9Y282 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERGIC3Q9Y282 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ERGIC3Q9Y282 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.31■□□□□ 0.84
ERGIC3Q9Y282 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
ERGIC3Q9Y282 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERGIC3Q9Y282 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ERGIC3Q9Y282 MIR3648-2-201ENST00000581792 180 ntBASIC20.31■□□□□ 0.84
ERGIC3Q9Y282 MIR3648-1-201ENST00000615959 180 ntBASIC20.31■□□□□ 0.84
ERGIC3Q9Y282 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERGIC3Q9Y282 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ERGIC3Q9Y282 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.31■□□□□ 0.84
ERGIC3Q9Y282 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ERGIC3Q9Y282 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERGIC3Q9Y282 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERGIC3Q9Y282 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ERGIC3Q9Y282 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
ERGIC3Q9Y282 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms