Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
HMG20AQ9NP66 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMG20AQ9NP66 RNF165-205ENST00000588679 2904 ntBASIC20.25■□□□□ 0.83
HMG20AQ9NP66 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HMG20AQ9NP66 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMG20AQ9NP66 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMG20AQ9NP66 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
HMG20AQ9NP66 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMG20AQ9NP66 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.25■□□□□ 0.83
HMG20AQ9NP66 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.25■□□□□ 0.83
HMG20AQ9NP66 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
HMG20AQ9NP66 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
HMG20AQ9NP66 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
HMG20AQ9NP66 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMG20AQ9NP66 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMG20AQ9NP66 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMG20AQ9NP66 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMG20AQ9NP66 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMG20AQ9NP66 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HMG20AQ9NP66 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMG20AQ9NP66 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.24■□□□□ 0.83
HMG20AQ9NP66 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.24■□□□□ 0.83
HMG20AQ9NP66 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
HMG20AQ9NP66 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HMG20AQ9NP66 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMG20AQ9NP66 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMG20AQ9NP66 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HMG20AQ9NP66 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMG20AQ9NP66 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.23■□□□□ 0.83
HMG20AQ9NP66 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
HMG20AQ9NP66 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HMG20AQ9NP66 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMG20AQ9NP66 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMG20AQ9NP66 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMG20AQ9NP66 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMG20AQ9NP66 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HMG20AQ9NP66 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMG20AQ9NP66 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMG20AQ9NP66 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.22■□□□□ 0.83
HMG20AQ9NP66 RP9P-202ENST00000450133 1212 ntBASIC20.22■□□□□ 0.83
HMG20AQ9NP66 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.22■□□□□ 0.83
HMG20AQ9NP66 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
HMG20AQ9NP66 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HMG20AQ9NP66 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMG20AQ9NP66 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HMG20AQ9NP66 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMG20AQ9NP66 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.21■□□□□ 0.83
HMG20AQ9NP66 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMG20AQ9NP66 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.21■□□□□ 0.83
HMG20AQ9NP66 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HMG20AQ9NP66 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HMG20AQ9NP66 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HMG20AQ9NP66 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HMG20AQ9NP66 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMG20AQ9NP66 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
HMG20AQ9NP66 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
HMG20AQ9NP66 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
HMG20AQ9NP66 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMG20AQ9NP66 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMG20AQ9NP66 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.2■□□□□ 0.82
HMG20AQ9NP66 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
HMG20AQ9NP66 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.2■□□□□ 0.82
HMG20AQ9NP66 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
HMG20AQ9NP66 ESRRAP2-201ENST00000418437 1549 ntBASIC20.2■□□□□ 0.82
HMG20AQ9NP66 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMG20AQ9NP66 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMG20AQ9NP66 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HMG20AQ9NP66 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMG20AQ9NP66 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMG20AQ9NP66 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMG20AQ9NP66 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
HMG20AQ9NP66 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HMG20AQ9NP66 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMG20AQ9NP66 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.19■□□□□ 0.82
HMG20AQ9NP66 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HMG20AQ9NP66 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
HMG20AQ9NP66 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.19■□□□□ 0.82
HMG20AQ9NP66 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMG20AQ9NP66 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMG20AQ9NP66 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMG20AQ9NP66 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMG20AQ9NP66 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.18■□□□□ 0.82
HMG20AQ9NP66 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
HMG20AQ9NP66 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMG20AQ9NP66 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMG20AQ9NP66 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
HMG20AQ9NP66 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
HMG20AQ9NP66 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMG20AQ9NP66 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.18■□□□□ 0.82
HMG20AQ9NP66 GPX1-201ENST00000419349 1106 ntBASIC20.18■□□□□ 0.82
HMG20AQ9NP66 AC093536.1-201ENST00000569153 554 ntBASIC20.18■□□□□ 0.82
HMG20AQ9NP66 AC007029.1-201ENST00000604183 313 ntBASIC20.18■□□□□ 0.82
HMG20AQ9NP66 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMG20AQ9NP66 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.18■□□□□ 0.82
HMG20AQ9NP66 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMG20AQ9NP66 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
HMG20AQ9NP66 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.18■□□□□ 0.82
HMG20AQ9NP66 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
HMG20AQ9NP66 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMG20AQ9NP66 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms