Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CMSS1Q9BQ75 AC022616.5-201ENST00000518796 181 ntBASIC19.03■□□□□ 0.64
CMSS1Q9BQ75 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.03■□□□□ 0.64
CMSS1Q9BQ75 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CMSS1Q9BQ75 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CMSS1Q9BQ75 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.03■□□□□ 0.64
CMSS1Q9BQ75 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CMSS1Q9BQ75 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CMSS1Q9BQ75 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CMSS1Q9BQ75 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CMSS1Q9BQ75 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CMSS1Q9BQ75 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CMSS1Q9BQ75 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CMSS1Q9BQ75 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CMSS1Q9BQ75 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.02■□□□□ 0.64
CMSS1Q9BQ75 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CMSS1Q9BQ75 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.02■□□□□ 0.64
CMSS1Q9BQ75 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CMSS1Q9BQ75 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CMSS1Q9BQ75 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CMSS1Q9BQ75 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CMSS1Q9BQ75 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CMSS1Q9BQ75 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CMSS1Q9BQ75 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CMSS1Q9BQ75 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.01■□□□□ 0.63
CMSS1Q9BQ75 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CMSS1Q9BQ75 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.01■□□□□ 0.63
CMSS1Q9BQ75 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.01■□□□□ 0.63
CMSS1Q9BQ75 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CMSS1Q9BQ75 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.01■□□□□ 0.63
CMSS1Q9BQ75 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.01■□□□□ 0.63
CMSS1Q9BQ75 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.01■□□□□ 0.63
CMSS1Q9BQ75 GUSBP5-202ENST00000510805 1989 ntBASIC19.01■□□□□ 0.63
CMSS1Q9BQ75 RNF165-205ENST00000588679 2904 ntBASIC19.01■□□□□ 0.63
CMSS1Q9BQ75 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19■□□□□ 0.63
CMSS1Q9BQ75 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CMSS1Q9BQ75 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19■□□□□ 0.63
CMSS1Q9BQ75 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CMSS1Q9BQ75 AC139795.1-202ENST00000500444 432 ntBASIC19■□□□□ 0.63
CMSS1Q9BQ75 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19■□□□□ 0.63
CMSS1Q9BQ75 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19■□□□□ 0.63
CMSS1Q9BQ75 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19■□□□□ 0.63
CMSS1Q9BQ75 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19■□□□□ 0.63
CMSS1Q9BQ75 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CMSS1Q9BQ75 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CMSS1Q9BQ75 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CMSS1Q9BQ75 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.99■□□□□ 0.63
CMSS1Q9BQ75 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CMSS1Q9BQ75 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CMSS1Q9BQ75 KRT18P60-201ENST00000312876 1297 ntBASIC18.99■□□□□ 0.63
CMSS1Q9BQ75 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CMSS1Q9BQ75 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CMSS1Q9BQ75 AC019171.1-201ENST00000601251 1056 ntBASIC18.99■□□□□ 0.63
CMSS1Q9BQ75 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CMSS1Q9BQ75 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.99■□□□□ 0.63
CMSS1Q9BQ75 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.99■□□□□ 0.63
CMSS1Q9BQ75 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CMSS1Q9BQ75 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.99■□□□□ 0.63
CMSS1Q9BQ75 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CMSS1Q9BQ75 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CMSS1Q9BQ75 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CMSS1Q9BQ75 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.98■□□□□ 0.63
CMSS1Q9BQ75 AL121603.2-201ENST00000557373 2117 ntBASIC18.98■□□□□ 0.63
CMSS1Q9BQ75 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CMSS1Q9BQ75 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CMSS1Q9BQ75 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CMSS1Q9BQ75 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.98■□□□□ 0.63
CMSS1Q9BQ75 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.98■□□□□ 0.63
CMSS1Q9BQ75 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.98■□□□□ 0.63
CMSS1Q9BQ75 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CMSS1Q9BQ75 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CMSS1Q9BQ75 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CMSS1Q9BQ75 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CMSS1Q9BQ75 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CMSS1Q9BQ75 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CMSS1Q9BQ75 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CMSS1Q9BQ75 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CMSS1Q9BQ75 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CMSS1Q9BQ75 LINC00565-201ENST00000562710 2331 ntBASIC18.97■□□□□ 0.63
CMSS1Q9BQ75 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CMSS1Q9BQ75 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CMSS1Q9BQ75 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CMSS1Q9BQ75 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CMSS1Q9BQ75 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CMSS1Q9BQ75 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CMSS1Q9BQ75 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.97■□□□□ 0.63
CMSS1Q9BQ75 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CMSS1Q9BQ75 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.97■□□□□ 0.63
CMSS1Q9BQ75 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CMSS1Q9BQ75 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CMSS1Q9BQ75 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CMSS1Q9BQ75 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CMSS1Q9BQ75 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
CMSS1Q9BQ75 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.96■□□□□ 0.63
CMSS1Q9BQ75 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CMSS1Q9BQ75 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CMSS1Q9BQ75 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
CMSS1Q9BQ75 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CMSS1Q9BQ75 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.96■□□□□ 0.63
CMSS1Q9BQ75 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms