Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
MUC4Q99102 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MUC4Q99102 GCA-201ENST00000233612 1694 ntTSL 2 BASIC16.33■□□□□ 0.2
MUC4Q99102 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MUC4Q99102 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC16.33■□□□□ 0.2
MUC4Q99102 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MUC4Q99102 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MUC4Q99102 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MUC4Q99102 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.33■□□□□ 0.2
MUC4Q99102 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.33■□□□□ 0.2
MUC4Q99102 YBX1P4-201ENST00000392794 808 ntBASIC16.33■□□□□ 0.2
MUC4Q99102 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MUC4Q99102 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.33■□□□□ 0.2
MUC4Q99102 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MUC4Q99102 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MUC4Q99102 USF2-207ENST00000595068 1612 ntTSL 5 BASIC16.32■□□□□ 0.2
MUC4Q99102 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
MUC4Q99102 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
MUC4Q99102 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MUC4Q99102 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC16.32■□□□□ 0.2
MUC4Q99102 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC16.32■□□□□ 0.2
MUC4Q99102 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
MUC4Q99102 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MUC4Q99102 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MUC4Q99102 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MUC4Q99102 GUSBP5-202ENST00000510805 1989 ntBASIC16.32■□□□□ 0.2
MUC4Q99102 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC16.32■□□□□ 0.2
MUC4Q99102 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MUC4Q99102 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
MUC4Q99102 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC16.31■□□□□ 0.2
MUC4Q99102 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
MUC4Q99102 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MUC4Q99102 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.31■□□□□ 0.2
MUC4Q99102 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MUC4Q99102 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MUC4Q99102 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MUC4Q99102 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MUC4Q99102 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MUC4Q99102 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MUC4Q99102 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.31■□□□□ 0.2
MUC4Q99102 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC16.31■□□□□ 0.2
MUC4Q99102 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.31■□□□□ 0.2
MUC4Q99102 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
MUC4Q99102 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MUC4Q99102 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MUC4Q99102 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.3■□□□□ 0.2
MUC4Q99102 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
MUC4Q99102 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MUC4Q99102 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
MUC4Q99102 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.3■□□□□ 0.2
MUC4Q99102 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MUC4Q99102 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MUC4Q99102 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
MUC4Q99102 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC16.3■□□□□ 0.2
MUC4Q99102 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.3■□□□□ 0.2
MUC4Q99102 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
MUC4Q99102 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC16.3■□□□□ 0.2
MUC4Q99102 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MUC4Q99102 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MUC4Q99102 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MUC4Q99102 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MUC4Q99102 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MUC4Q99102 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MUC4Q99102 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC16.29■□□□□ 0.2
MUC4Q99102 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MUC4Q99102 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
MUC4Q99102 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC16.29■□□□□ 0.2
MUC4Q99102 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MUC4Q99102 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
MUC4Q99102 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MUC4Q99102 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MUC4Q99102 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MUC4Q99102 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MUC4Q99102 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC16.28■□□□□ 0.2
MUC4Q99102 AC137630.3-201ENST00000607245 391 ntBASIC16.28■□□□□ 0.2
MUC4Q99102 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
MUC4Q99102 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
MUC4Q99102 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MUC4Q99102 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MUC4Q99102 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MUC4Q99102 AL356441.2-201ENST00000443009 864 ntBASIC16.28■□□□□ 0.2
MUC4Q99102 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MUC4Q99102 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.28■□□□□ 0.2
MUC4Q99102 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
MUC4Q99102 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
MUC4Q99102 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MUC4Q99102 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MUC4Q99102 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MUC4Q99102 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MUC4Q99102 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.27■□□□□ 0.2
MUC4Q99102 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
MUC4Q99102 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MUC4Q99102 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
MUC4Q99102 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MUC4Q99102 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC16.27■□□□□ 0.2
MUC4Q99102 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MUC4Q99102 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC16.27■□□□□ 0.19
MUC4Q99102 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MUC4Q99102 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MUC4Q99102 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms