Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.32■■□□□ 1.32
CDK5RAP1Q96SZ6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDK5RAP1Q96SZ6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.32■■□□□ 1.32
CDK5RAP1Q96SZ6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDK5RAP1Q96SZ6 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
CDK5RAP1Q96SZ6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDK5RAP1Q96SZ6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDK5RAP1Q96SZ6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
CDK5RAP1Q96SZ6 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
CDK5RAP1Q96SZ6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.31■■□□□ 1.32
CDK5RAP1Q96SZ6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CDK5RAP1Q96SZ6 SUDS3P1-201ENST00000505831 966 ntBASIC23.31■■□□□ 1.32
CDK5RAP1Q96SZ6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.31■■□□□ 1.32
CDK5RAP1Q96SZ6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.31■■□□□ 1.32
CDK5RAP1Q96SZ6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDK5RAP1Q96SZ6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.31■■□□□ 1.32
CDK5RAP1Q96SZ6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDK5RAP1Q96SZ6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.3■■□□□ 1.32
CDK5RAP1Q96SZ6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDK5RAP1Q96SZ6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDK5RAP1Q96SZ6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDK5RAP1Q96SZ6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.29■■□□□ 1.32
CDK5RAP1Q96SZ6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDK5RAP1Q96SZ6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDK5RAP1Q96SZ6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDK5RAP1Q96SZ6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
CDK5RAP1Q96SZ6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDK5RAP1Q96SZ6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDK5RAP1Q96SZ6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.28■■□□□ 1.32
CDK5RAP1Q96SZ6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDK5RAP1Q96SZ6 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
CDK5RAP1Q96SZ6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.28■■□□□ 1.32
CDK5RAP1Q96SZ6 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CDK5RAP1Q96SZ6 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CDK5RAP1Q96SZ6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.28■■□□□ 1.32
CDK5RAP1Q96SZ6 AC091305.1-201ENST00000479476 895 ntBASIC23.28■■□□□ 1.32
CDK5RAP1Q96SZ6 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.28■■□□□ 1.32
CDK5RAP1Q96SZ6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.28■■□□□ 1.32
CDK5RAP1Q96SZ6 AC027682.1-201ENST00000562846 899 ntBASIC23.28■■□□□ 1.32
CDK5RAP1Q96SZ6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CDK5RAP1Q96SZ6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
CDK5RAP1Q96SZ6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDK5RAP1Q96SZ6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDK5RAP1Q96SZ6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.28■■□□□ 1.32
CDK5RAP1Q96SZ6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CDK5RAP1Q96SZ6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.27■■□□□ 1.32
CDK5RAP1Q96SZ6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CDK5RAP1Q96SZ6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDK5RAP1Q96SZ6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDK5RAP1Q96SZ6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CDK5RAP1Q96SZ6 MIR939-201ENST00000401314 82 ntBASIC23.27■■□□□ 1.32
CDK5RAP1Q96SZ6 AP001330.3-201ENST00000520123 633 ntBASIC23.27■■□□□ 1.32
CDK5RAP1Q96SZ6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
CDK5RAP1Q96SZ6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDK5RAP1Q96SZ6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDK5RAP1Q96SZ6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.26■■□□□ 1.31
CDK5RAP1Q96SZ6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.26■■□□□ 1.31
CDK5RAP1Q96SZ6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDK5RAP1Q96SZ6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDK5RAP1Q96SZ6 AF213884.3-201ENST00000563833 479 ntBASIC23.26■■□□□ 1.31
CDK5RAP1Q96SZ6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.26■■□□□ 1.31
CDK5RAP1Q96SZ6 AC133637.1-201ENST00000624115 1537 ntBASIC23.26■■□□□ 1.31
CDK5RAP1Q96SZ6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDK5RAP1Q96SZ6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
CDK5RAP1Q96SZ6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CDK5RAP1Q96SZ6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDK5RAP1Q96SZ6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.26■■□□□ 1.31
CDK5RAP1Q96SZ6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDK5RAP1Q96SZ6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.25■■□□□ 1.31
CDK5RAP1Q96SZ6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDK5RAP1Q96SZ6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.25■■□□□ 1.31
CDK5RAP1Q96SZ6 AL136967.2-201ENST00000623968 743 ntBASIC23.25■■□□□ 1.31
CDK5RAP1Q96SZ6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.25■■□□□ 1.31
CDK5RAP1Q96SZ6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
CDK5RAP1Q96SZ6 AC079630.1-202ENST00000618127 1840 ntBASIC23.24■■□□□ 1.31
CDK5RAP1Q96SZ6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CDK5RAP1Q96SZ6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDK5RAP1Q96SZ6 BX842568.3-201ENST00000418104 571 ntBASIC23.24■■□□□ 1.31
CDK5RAP1Q96SZ6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.24■■□□□ 1.31
CDK5RAP1Q96SZ6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.24■■□□□ 1.31
CDK5RAP1Q96SZ6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDK5RAP1Q96SZ6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.24■■□□□ 1.31
CDK5RAP1Q96SZ6 RASA4CP-201ENST00000424092 1398 ntBASIC23.24■■□□□ 1.31
CDK5RAP1Q96SZ6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDK5RAP1Q96SZ6 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
CDK5RAP1Q96SZ6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDK5RAP1Q96SZ6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CDK5RAP1Q96SZ6 AC233992.3-201ENST00000607491 485 ntBASIC23.23■■□□□ 1.31
CDK5RAP1Q96SZ6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDK5RAP1Q96SZ6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.23■■□□□ 1.31
CDK5RAP1Q96SZ6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.23■■□□□ 1.31
CDK5RAP1Q96SZ6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDK5RAP1Q96SZ6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.22■■□□□ 1.31
CDK5RAP1Q96SZ6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.22■■□□□ 1.31
CDK5RAP1Q96SZ6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
CDK5RAP1Q96SZ6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDK5RAP1Q96SZ6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.22■■□□□ 1.31
CDK5RAP1Q96SZ6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
CDK5RAP1Q96SZ6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.22■■□□□ 1.31
CDK5RAP1Q96SZ6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms