Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB40CQ96S21 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40CQ96S21 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40CQ96S21 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40CQ96S21 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RAB40CQ96S21 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RAB40CQ96S21 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
RAB40CQ96S21 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB40CQ96S21 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.14■□□□□ 0.49
RAB40CQ96S21 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB40CQ96S21 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RAB40CQ96S21 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.14■□□□□ 0.49
RAB40CQ96S21 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB40CQ96S21 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RAB40CQ96S21 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RAB40CQ96S21 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB40CQ96S21 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RAB40CQ96S21 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAB40CQ96S21 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.13■□□□□ 0.49
RAB40CQ96S21 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.13■□□□□ 0.49
RAB40CQ96S21 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAB40CQ96S21 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.13■□□□□ 0.49
RAB40CQ96S21 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAB40CQ96S21 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.13■□□□□ 0.49
RAB40CQ96S21 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB40CQ96S21 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RAB40CQ96S21 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB40CQ96S21 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.13■□□□□ 0.49
RAB40CQ96S21 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RAB40CQ96S21 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB40CQ96S21 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB40CQ96S21 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB40CQ96S21 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB40CQ96S21 AC092053.2-201ENST00000640557 1818 ntBASIC18.12■□□□□ 0.49
RAB40CQ96S21 RPS2P7-201ENST00000447334 885 ntBASIC18.12■□□□□ 0.49
RAB40CQ96S21 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.12■□□□□ 0.49
RAB40CQ96S21 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.12■□□□□ 0.49
RAB40CQ96S21 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB40CQ96S21 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB40CQ96S21 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB40CQ96S21 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40CQ96S21 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40CQ96S21 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40CQ96S21 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
RAB40CQ96S21 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40CQ96S21 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40CQ96S21 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RAB40CQ96S21 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.11■□□□□ 0.49
RAB40CQ96S21 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.11■□□□□ 0.49
RAB40CQ96S21 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.11■□□□□ 0.49
RAB40CQ96S21 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RAB40CQ96S21 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB40CQ96S21 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAB40CQ96S21 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB40CQ96S21 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAB40CQ96S21 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB40CQ96S21 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB40CQ96S21 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB40CQ96S21 C11orf96-202ENST00000528572 1834 ntBASIC18.1■□□□□ 0.49
RAB40CQ96S21 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RAB40CQ96S21 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.1■□□□□ 0.49
RAB40CQ96S21 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB40CQ96S21 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB40CQ96S21 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB40CQ96S21 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB40CQ96S21 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB40CQ96S21 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.09■□□□□ 0.49
RAB40CQ96S21 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
RAB40CQ96S21 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB40CQ96S21 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB40CQ96S21 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB40CQ96S21 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RAB40CQ96S21 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RAB40CQ96S21 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RAB40CQ96S21 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB40CQ96S21 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB40CQ96S21 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RAB40CQ96S21 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.09■□□□□ 0.49
RAB40CQ96S21 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RAB40CQ96S21 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.09■□□□□ 0.49
RAB40CQ96S21 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RAB40CQ96S21 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB40CQ96S21 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB40CQ96S21 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.09■□□□□ 0.49
RAB40CQ96S21 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RAB40CQ96S21 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
RAB40CQ96S21 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
RAB40CQ96S21 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.08■□□□□ 0.49
RAB40CQ96S21 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RAB40CQ96S21 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RAB40CQ96S21 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RAB40CQ96S21 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.08■□□□□ 0.48
RAB40CQ96S21 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB40CQ96S21 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RAB40CQ96S21 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB40CQ96S21 AL024507.2-201ENST00000606070 2574 ntBASIC18.08■□□□□ 0.48
RAB40CQ96S21 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB40CQ96S21 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB40CQ96S21 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.08■□□□□ 0.48
RAB40CQ96S21 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms