Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.02■□□□□ 0.63
CITED4Q96RK1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CITED4Q96RK1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CITED4Q96RK1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.63
CITED4Q96RK1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CITED4Q96RK1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CITED4Q96RK1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CITED4Q96RK1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.01■□□□□ 0.63
CITED4Q96RK1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CITED4Q96RK1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CITED4Q96RK1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CITED4Q96RK1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.01■□□□□ 0.63
CITED4Q96RK1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
CITED4Q96RK1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CITED4Q96RK1 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CITED4Q96RK1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
CITED4Q96RK1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19■□□□□ 0.63
CITED4Q96RK1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CITED4Q96RK1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19■□□□□ 0.63
CITED4Q96RK1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CITED4Q96RK1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19■□□□□ 0.63
CITED4Q96RK1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CITED4Q96RK1 RARRES2P2-201ENST00000394842 485 ntBASIC19■□□□□ 0.63
CITED4Q96RK1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19■□□□□ 0.63
CITED4Q96RK1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19■□□□□ 0.63
CITED4Q96RK1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
CITED4Q96RK1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CITED4Q96RK1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CITED4Q96RK1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19■□□□□ 0.63
CITED4Q96RK1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CITED4Q96RK1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CITED4Q96RK1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CITED4Q96RK1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CITED4Q96RK1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.99■□□□□ 0.63
CITED4Q96RK1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.99■□□□□ 0.63
CITED4Q96RK1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.99■□□□□ 0.63
CITED4Q96RK1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CITED4Q96RK1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CITED4Q96RK1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.99■□□□□ 0.63
CITED4Q96RK1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CITED4Q96RK1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.99■□□□□ 0.63
CITED4Q96RK1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CITED4Q96RK1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CITED4Q96RK1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CITED4Q96RK1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CITED4Q96RK1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CITED4Q96RK1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
CITED4Q96RK1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CITED4Q96RK1 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CITED4Q96RK1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CITED4Q96RK1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.99■□□□□ 0.63
CITED4Q96RK1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CITED4Q96RK1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CITED4Q96RK1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.99■□□□□ 0.63
CITED4Q96RK1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.99■□□□□ 0.63
CITED4Q96RK1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CITED4Q96RK1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CITED4Q96RK1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CITED4Q96RK1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CITED4Q96RK1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.98■□□□□ 0.63
CITED4Q96RK1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.98■□□□□ 0.63
CITED4Q96RK1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.98■□□□□ 0.63
CITED4Q96RK1 ABHD17AP5-201ENST00000580133 923 ntBASIC18.98■□□□□ 0.63
CITED4Q96RK1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.98■□□□□ 0.63
CITED4Q96RK1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CITED4Q96RK1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CITED4Q96RK1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CITED4Q96RK1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CITED4Q96RK1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.98■□□□□ 0.63
CITED4Q96RK1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CITED4Q96RK1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CITED4Q96RK1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
CITED4Q96RK1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.97■□□□□ 0.63
CITED4Q96RK1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CITED4Q96RK1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CITED4Q96RK1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CITED4Q96RK1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CITED4Q96RK1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CITED4Q96RK1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CITED4Q96RK1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.97■□□□□ 0.63
CITED4Q96RK1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.97■□□□□ 0.63
CITED4Q96RK1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CITED4Q96RK1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CITED4Q96RK1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.97■□□□□ 0.63
CITED4Q96RK1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CITED4Q96RK1 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CITED4Q96RK1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CITED4Q96RK1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CITED4Q96RK1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CITED4Q96RK1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CITED4Q96RK1 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CITED4Q96RK1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CITED4Q96RK1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CITED4Q96RK1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CITED4Q96RK1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.96■□□□□ 0.63
CITED4Q96RK1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CITED4Q96RK1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CITED4Q96RK1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CITED4Q96RK1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.95■□□□□ 0.62
CITED4Q96RK1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms