Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.33■□□□□ 0.68
HIST1H2AAQ96QV6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.33■□□□□ 0.68
HIST1H2AAQ96QV6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HIST1H2AAQ96QV6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HIST1H2AAQ96QV6 AC092068.2-201ENST00000590491 1708 ntBASIC19.33■□□□□ 0.68
HIST1H2AAQ96QV6 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HIST1H2AAQ96QV6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST1H2AAQ96QV6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HIST1H2AAQ96QV6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HIST1H2AAQ96QV6 AC005703.6-201ENST00000623265 1329 ntBASIC19.32■□□□□ 0.68
HIST1H2AAQ96QV6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST1H2AAQ96QV6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST1H2AAQ96QV6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
HIST1H2AAQ96QV6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HIST1H2AAQ96QV6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HIST1H2AAQ96QV6 MIR6722-201ENST00000617286 78 ntBASIC19.32■□□□□ 0.68
HIST1H2AAQ96QV6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.32■□□□□ 0.68
HIST1H2AAQ96QV6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST1H2AAQ96QV6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
HIST1H2AAQ96QV6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
HIST1H2AAQ96QV6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HIST1H2AAQ96QV6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.32■□□□□ 0.68
HIST1H2AAQ96QV6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.31■□□□□ 0.68
HIST1H2AAQ96QV6 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H2AAQ96QV6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H2AAQ96QV6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H2AAQ96QV6 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.31■□□□□ 0.68
HIST1H2AAQ96QV6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.31■□□□□ 0.68
HIST1H2AAQ96QV6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H2AAQ96QV6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H2AAQ96QV6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HIST1H2AAQ96QV6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H2AAQ96QV6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H2AAQ96QV6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H2AAQ96QV6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H2AAQ96QV6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.31■□□□□ 0.68
HIST1H2AAQ96QV6 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.31■□□□□ 0.68
HIST1H2AAQ96QV6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H2AAQ96QV6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
HIST1H2AAQ96QV6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H2AAQ96QV6 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.31■□□□□ 0.68
HIST1H2AAQ96QV6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H2AAQ96QV6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H2AAQ96QV6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H2AAQ96QV6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H2AAQ96QV6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H2AAQ96QV6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.31■□□□□ 0.68
HIST1H2AAQ96QV6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H2AAQ96QV6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H2AAQ96QV6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H2AAQ96QV6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H2AAQ96QV6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H2AAQ96QV6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.3■□□□□ 0.68
HIST1H2AAQ96QV6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H2AAQ96QV6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H2AAQ96QV6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.3■□□□□ 0.68
HIST1H2AAQ96QV6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HIST1H2AAQ96QV6 AC239859.2-201ENST00000444165 318 ntBASIC19.3■□□□□ 0.68
HIST1H2AAQ96QV6 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
HIST1H2AAQ96QV6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
HIST1H2AAQ96QV6 MIR4787-201ENST00000607364 84 ntBASIC19.3■□□□□ 0.68
HIST1H2AAQ96QV6 AC092028.1-203ENST00000608262 953 ntBASIC19.3■□□□□ 0.68
HIST1H2AAQ96QV6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.3■□□□□ 0.68
HIST1H2AAQ96QV6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H2AAQ96QV6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H2AAQ96QV6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H2AAQ96QV6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H2AAQ96QV6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.29■□□□□ 0.68
HIST1H2AAQ96QV6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.29■□□□□ 0.68
HIST1H2AAQ96QV6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H2AAQ96QV6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.29■□□□□ 0.68
HIST1H2AAQ96QV6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H2AAQ96QV6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H2AAQ96QV6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H2AAQ96QV6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H2AAQ96QV6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H2AAQ96QV6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.28■□□□□ 0.68
HIST1H2AAQ96QV6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H2AAQ96QV6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.28■□□□□ 0.68
HIST1H2AAQ96QV6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H2AAQ96QV6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H2AAQ96QV6 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HIST1H2AAQ96QV6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H2AAQ96QV6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H2AAQ96QV6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H2AAQ96QV6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.27■□□□□ 0.68
HIST1H2AAQ96QV6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
HIST1H2AAQ96QV6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HIST1H2AAQ96QV6 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.27■□□□□ 0.68
HIST1H2AAQ96QV6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HIST1H2AAQ96QV6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.27■□□□□ 0.68
HIST1H2AAQ96QV6 MTDHP2-201ENST00000601468 714 ntBASIC19.27■□□□□ 0.68
HIST1H2AAQ96QV6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.27■□□□□ 0.68
HIST1H2AAQ96QV6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.67
HIST1H2AAQ96QV6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HIST1H2AAQ96QV6 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST1H2AAQ96QV6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST1H2AAQ96QV6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.26■□□□□ 0.67
HIST1H2AAQ96QV6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST1H2AAQ96QV6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms