Protein–RNA interactions for Protein: Q96N35

LINC00052, Putative uncharacterized protein encoded by LINC00052, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00052Q96N35 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC18.39■□□□□ 0.54
LINC00052Q96N35 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.39■□□□□ 0.53
LINC00052Q96N35 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LINC00052Q96N35 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LINC00052Q96N35 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
LINC00052Q96N35 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LINC00052Q96N35 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LINC00052Q96N35 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.39■□□□□ 0.53
LINC00052Q96N35 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LINC00052Q96N35 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.39■□□□□ 0.53
LINC00052Q96N35 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.39■□□□□ 0.53
LINC00052Q96N35 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LINC00052Q96N35 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.39■□□□□ 0.53
LINC00052Q96N35 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LINC00052Q96N35 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LINC00052Q96N35 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
LINC00052Q96N35 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LINC00052Q96N35 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LINC00052Q96N35 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LINC00052Q96N35 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC00052Q96N35 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LINC00052Q96N35 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.38■□□□□ 0.53
LINC00052Q96N35 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.38■□□□□ 0.53
LINC00052Q96N35 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC00052Q96N35 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LINC00052Q96N35 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LINC00052Q96N35 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.38■□□□□ 0.53
LINC00052Q96N35 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LINC00052Q96N35 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
LINC00052Q96N35 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.37■□□□□ 0.53
LINC00052Q96N35 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LINC00052Q96N35 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.37■□□□□ 0.53
LINC00052Q96N35 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC00052Q96N35 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC00052Q96N35 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.37■□□□□ 0.53
LINC00052Q96N35 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.37■□□□□ 0.53
LINC00052Q96N35 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.36■□□□□ 0.53
LINC00052Q96N35 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC00052Q96N35 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC00052Q96N35 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC00052Q96N35 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LINC00052Q96N35 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.36■□□□□ 0.53
LINC00052Q96N35 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
LINC00052Q96N35 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC00052Q96N35 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC00052Q96N35 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC00052Q96N35 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.36■□□□□ 0.53
LINC00052Q96N35 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
LINC00052Q96N35 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00052Q96N35 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00052Q96N35 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00052Q96N35 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
LINC00052Q96N35 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00052Q96N35 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.35■□□□□ 0.53
LINC00052Q96N35 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00052Q96N35 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.35■□□□□ 0.53
LINC00052Q96N35 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00052Q96N35 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00052Q96N35 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00052Q96N35 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00052Q96N35 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.34■□□□□ 0.53
LINC00052Q96N35 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LINC00052Q96N35 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00052Q96N35 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.34■□□□□ 0.53
LINC00052Q96N35 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.34■□□□□ 0.53
LINC00052Q96N35 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00052Q96N35 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00052Q96N35 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.34■□□□□ 0.53
LINC00052Q96N35 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.34■□□□□ 0.53
LINC00052Q96N35 AL359504.2-201ENST00000605506 1601 ntBASIC18.34■□□□□ 0.53
LINC00052Q96N35 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
LINC00052Q96N35 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LINC00052Q96N35 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.33■□□□□ 0.53
LINC00052Q96N35 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LINC00052Q96N35 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.33■□□□□ 0.53
LINC00052Q96N35 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LINC00052Q96N35 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LINC00052Q96N35 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00052Q96N35 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00052Q96N35 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.33■□□□□ 0.52
LINC00052Q96N35 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
LINC00052Q96N35 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00052Q96N35 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00052Q96N35 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00052Q96N35 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
LINC00052Q96N35 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
LINC00052Q96N35 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00052Q96N35 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00052Q96N35 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00052Q96N35 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
LINC00052Q96N35 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00052Q96N35 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00052Q96N35 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00052Q96N35 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00052Q96N35 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00052Q96N35 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00052Q96N35 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00052Q96N35 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.32■□□□□ 0.52
LINC00052Q96N35 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00052Q96N35 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms