Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ZSWIM3Q96MP5 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZSWIM3Q96MP5 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZSWIM3Q96MP5 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
ZSWIM3Q96MP5 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZSWIM3Q96MP5 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
ZSWIM3Q96MP5 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZSWIM3Q96MP5 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
ZSWIM3Q96MP5 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.31■■□□□ 1.32
ZSWIM3Q96MP5 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ZSWIM3Q96MP5 AL499627.2-201ENST00000606283 725 ntBASIC23.31■■□□□ 1.32
ZSWIM3Q96MP5 IKBKGP1-201ENST00000612193 1073 ntBASIC23.31■■□□□ 1.32
ZSWIM3Q96MP5 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.32
ZSWIM3Q96MP5 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZSWIM3Q96MP5 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZSWIM3Q96MP5 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.3■■□□□ 1.32
ZSWIM3Q96MP5 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.3■■□□□ 1.32
ZSWIM3Q96MP5 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZSWIM3Q96MP5 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
ZSWIM3Q96MP5 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ZSWIM3Q96MP5 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZSWIM3Q96MP5 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZSWIM3Q96MP5 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZSWIM3Q96MP5 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZSWIM3Q96MP5 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
ZSWIM3Q96MP5 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.3■■□□□ 1.32
ZSWIM3Q96MP5 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ZSWIM3Q96MP5 IGHV3-19-201ENST00000521488 291 ntBASIC23.3■■□□□ 1.32
ZSWIM3Q96MP5 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.3■■□□□ 1.32
ZSWIM3Q96MP5 MIR6084-201ENST00000622012 110 ntBASIC23.3■■□□□ 1.32
ZSWIM3Q96MP5 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ZSWIM3Q96MP5 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.29■■□□□ 1.32
ZSWIM3Q96MP5 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZSWIM3Q96MP5 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.29■■□□□ 1.32
ZSWIM3Q96MP5 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.29■■□□□ 1.32
ZSWIM3Q96MP5 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
ZSWIM3Q96MP5 DUX4L2-201ENST00000561772 1275 ntBASIC23.29■■□□□ 1.32
ZSWIM3Q96MP5 AC022517.1-201ENST00000592429 346 ntBASIC23.29■■□□□ 1.32
ZSWIM3Q96MP5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.29■■□□□ 1.32
ZSWIM3Q96MP5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ZSWIM3Q96MP5 DUX4L6-201ENST00000626483 1275 ntBASIC23.29■■□□□ 1.32
ZSWIM3Q96MP5 DUX4L1-201ENST00000627662 1275 ntBASIC23.29■■□□□ 1.32
ZSWIM3Q96MP5 DUX4L8-201ENST00000629013 1275 ntBASIC23.29■■□□□ 1.32
ZSWIM3Q96MP5 DUX4L3-201ENST00000630187 1275 ntBASIC23.29■■□□□ 1.32
ZSWIM3Q96MP5 DUX4L7-201ENST00000630678 1275 ntBASIC23.29■■□□□ 1.32
ZSWIM3Q96MP5 DUX4L5-201ENST00000630834 1275 ntBASIC23.29■■□□□ 1.32
ZSWIM3Q96MP5 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
ZSWIM3Q96MP5 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZSWIM3Q96MP5 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ZSWIM3Q96MP5 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.28■■□□□ 1.32
ZSWIM3Q96MP5 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZSWIM3Q96MP5 KRT18P5-201ENST00000436075 1291 ntBASIC23.28■■□□□ 1.32
ZSWIM3Q96MP5 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.28■■□□□ 1.32
ZSWIM3Q96MP5 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.28■■□□□ 1.32
ZSWIM3Q96MP5 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.28■■□□□ 1.32
ZSWIM3Q96MP5 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ZSWIM3Q96MP5 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ZSWIM3Q96MP5 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZSWIM3Q96MP5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
ZSWIM3Q96MP5 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZSWIM3Q96MP5 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.27■■□□□ 1.32
ZSWIM3Q96MP5 MIR572-201ENST00000384983 95 ntBASIC23.27■■□□□ 1.32
ZSWIM3Q96MP5 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.27■■□□□ 1.32
ZSWIM3Q96MP5 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ZSWIM3Q96MP5 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.27■■□□□ 1.32
ZSWIM3Q96MP5 AL358852.1-201ENST00000623174 1268 ntBASIC23.27■■□□□ 1.32
ZSWIM3Q96MP5 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZSWIM3Q96MP5 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.27■■□□□ 1.32
ZSWIM3Q96MP5 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZSWIM3Q96MP5 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.27■■□□□ 1.32
ZSWIM3Q96MP5 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZSWIM3Q96MP5 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.31
ZSWIM3Q96MP5 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZSWIM3Q96MP5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.26■■□□□ 1.31
ZSWIM3Q96MP5 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ZSWIM3Q96MP5 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
ZSWIM3Q96MP5 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
ZSWIM3Q96MP5 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZSWIM3Q96MP5 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZSWIM3Q96MP5 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.26■■□□□ 1.31
ZSWIM3Q96MP5 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ZSWIM3Q96MP5 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZSWIM3Q96MP5 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.25■■□□□ 1.31
ZSWIM3Q96MP5 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZSWIM3Q96MP5 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.25■■□□□ 1.31
ZSWIM3Q96MP5 AC027612.3-201ENST00000413684 1047 ntBASIC23.25■■□□□ 1.31
ZSWIM3Q96MP5 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZSWIM3Q96MP5 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.25■■□□□ 1.31
ZSWIM3Q96MP5 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.25■■□□□ 1.31
ZSWIM3Q96MP5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
ZSWIM3Q96MP5 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZSWIM3Q96MP5 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.25■■□□□ 1.31
ZSWIM3Q96MP5 AC142381.3-201ENST00000568208 1670 ntBASIC23.25■■□□□ 1.31
ZSWIM3Q96MP5 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZSWIM3Q96MP5 FP325331.1-202ENST00000623531 1380 ntBASIC23.25■■□□□ 1.31
ZSWIM3Q96MP5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.24■■□□□ 1.31
ZSWIM3Q96MP5 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZSWIM3Q96MP5 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
ZSWIM3Q96MP5 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZSWIM3Q96MP5 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms