Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC30.04■■■□□ 2.4
CFAP53Q96M91 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CFAP53Q96M91 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CFAP53Q96M91 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
CFAP53Q96M91 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CFAP53Q96M91 AC024257.2-201ENST00000549699 147 ntBASIC30.03■■■□□ 2.4
CFAP53Q96M91 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC30.03■■■□□ 2.4
CFAP53Q96M91 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CFAP53Q96M91 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC30.02■■■□□ 2.4
CFAP53Q96M91 GTSE1-AS1-202ENST00000623117 1518 ntBASIC30.02■■■□□ 2.4
CFAP53Q96M91 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC30.02■■■□□ 2.4
CFAP53Q96M91 MIR3181-201ENST00000578512 73 ntBASIC30.02■■■□□ 2.4
CFAP53Q96M91 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC30.02■■■□□ 2.4
CFAP53Q96M91 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC30.02■■■□□ 2.4
CFAP53Q96M91 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.4
CFAP53Q96M91 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
CFAP53Q96M91 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC30.01■■■□□ 2.39
CFAP53Q96M91 pRNA.6-201ENST00000610482 90 ntBASIC30.01■■■□□ 2.39
CFAP53Q96M91 pRNA.5-201ENST00000612139 90 ntBASIC30.01■■■□□ 2.39
CFAP53Q96M91 AC011298.3-201ENST00000615796 283 ntBASIC30.01■■■□□ 2.39
CFAP53Q96M91 pRNA.11-201ENST00000618423 90 ntBASIC30.01■■■□□ 2.39
CFAP53Q96M91 pRNA.13-201ENST00000619112 90 ntBASIC30.01■■■□□ 2.39
CFAP53Q96M91 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.39
CFAP53Q96M91 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CFAP53Q96M91 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC30■■■□□ 2.39
CFAP53Q96M91 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC30■■■□□ 2.39
CFAP53Q96M91 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC30■■■□□ 2.39
CFAP53Q96M91 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CFAP53Q96M91 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC30■■■□□ 2.39
CFAP53Q96M91 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC30■■■□□ 2.39
CFAP53Q96M91 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CFAP53Q96M91 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
CFAP53Q96M91 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CFAP53Q96M91 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
CFAP53Q96M91 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CFAP53Q96M91 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CFAP53Q96M91 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CFAP53Q96M91 MIR638-201ENST00000385237 100 ntBASIC29.99■■■□□ 2.39
CFAP53Q96M91 HES6-206ENST00000409574 738 ntTSL 2 BASIC29.99■■■□□ 2.39
CFAP53Q96M91 AC133561.4-201ENST00000566112 224 ntBASIC29.99■■■□□ 2.39
CFAP53Q96M91 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC29.99■■■□□ 2.39
CFAP53Q96M91 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC29.99■■■□□ 2.39
CFAP53Q96M91 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
CFAP53Q96M91 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
CFAP53Q96M91 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CFAP53Q96M91 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CFAP53Q96M91 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC29.98■■■□□ 2.39
CFAP53Q96M91 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CFAP53Q96M91 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC29.98■■■□□ 2.39
CFAP53Q96M91 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CFAP53Q96M91 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC29.98■■■□□ 2.39
CFAP53Q96M91 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CFAP53Q96M91 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC29.97■■■□□ 2.39
CFAP53Q96M91 ANOS2P-203ENST00000472227 1816 ntBASIC29.97■■■□□ 2.39
CFAP53Q96M91 PTMA-205ENST00000410064 814 ntTSL 2 BASIC29.97■■■□□ 2.39
CFAP53Q96M91 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC29.97■■■□□ 2.39
CFAP53Q96M91 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC29.97■■■□□ 2.39
CFAP53Q96M91 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC29.96■■■□□ 2.39
CFAP53Q96M91 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CFAP53Q96M91 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC29.96■■■□□ 2.39
CFAP53Q96M91 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
CFAP53Q96M91 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CFAP53Q96M91 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC29.96■■■□□ 2.39
CFAP53Q96M91 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC29.95■■■□□ 2.39
CFAP53Q96M91 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC29.95■■■□□ 2.39
CFAP53Q96M91 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC29.95■■■□□ 2.39
CFAP53Q96M91 AL499627.2-201ENST00000606283 725 ntBASIC29.95■■■□□ 2.39
CFAP53Q96M91 AC136469.2-201ENST00000623944 1028 ntBASIC29.95■■■□□ 2.39
CFAP53Q96M91 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
CFAP53Q96M91 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC29.95■■■□□ 2.38
CFAP53Q96M91 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
CFAP53Q96M91 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC29.95■■■□□ 2.38
CFAP53Q96M91 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC29.95■■■□□ 2.38
CFAP53Q96M91 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
CFAP53Q96M91 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC29.94■■■□□ 2.38
CFAP53Q96M91 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC29.94■■■□□ 2.38
CFAP53Q96M91 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
CFAP53Q96M91 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC29.94■■■□□ 2.38
CFAP53Q96M91 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC29.94■■■□□ 2.38
CFAP53Q96M91 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC29.94■■■□□ 2.38
CFAP53Q96M91 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CFAP53Q96M91 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CFAP53Q96M91 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CFAP53Q96M91 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC29.93■■■□□ 2.38
CFAP53Q96M91 MIR4767-201ENST00000582827 78 ntBASIC29.93■■■□□ 2.38
CFAP53Q96M91 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CFAP53Q96M91 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CFAP53Q96M91 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CFAP53Q96M91 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC29.93■■■□□ 2.38
CFAP53Q96M91 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC29.93■■■□□ 2.38
CFAP53Q96M91 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
CFAP53Q96M91 AL353803.4-201ENST00000565882 1934 ntBASIC29.92■■■□□ 2.38
CFAP53Q96M91 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC29.92■■■□□ 2.38
CFAP53Q96M91 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CFAP53Q96M91 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC29.92■■■□□ 2.38
CFAP53Q96M91 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
CFAP53Q96M91 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC29.92■■■□□ 2.38
CFAP53Q96M91 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC29.92■■■□□ 2.38
CFAP53Q96M91 AC092068.2-201ENST00000590491 1708 ntBASIC29.91■■■□□ 2.38
CFAP53Q96M91 EDA-201ENST00000338901 1233 ntBASIC29.91■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms