Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDLIM5Q96HC4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDLIM5Q96HC4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDLIM5Q96HC4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.96■■□□□ 1.11
PDLIM5Q96HC4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
PDLIM5Q96HC4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.11
PDLIM5Q96HC4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PDLIM5Q96HC4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDLIM5Q96HC4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDLIM5Q96HC4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDLIM5Q96HC4 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.95■■□□□ 1.1
PDLIM5Q96HC4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.95■■□□□ 1.1
PDLIM5Q96HC4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDLIM5Q96HC4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
PDLIM5Q96HC4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.95■■□□□ 1.1
PDLIM5Q96HC4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
PDLIM5Q96HC4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.94■■□□□ 1.1
PDLIM5Q96HC4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.94■■□□□ 1.1
PDLIM5Q96HC4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDLIM5Q96HC4 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.94■■□□□ 1.1
PDLIM5Q96HC4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDLIM5Q96HC4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.94■■□□□ 1.1
PDLIM5Q96HC4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.94■■□□□ 1.1
PDLIM5Q96HC4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
PDLIM5Q96HC4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PDLIM5Q96HC4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDLIM5Q96HC4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.93■■□□□ 1.1
PDLIM5Q96HC4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDLIM5Q96HC4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.93■■□□□ 1.1
PDLIM5Q96HC4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.93■■□□□ 1.1
PDLIM5Q96HC4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.93■■□□□ 1.1
PDLIM5Q96HC4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
PDLIM5Q96HC4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.92■■□□□ 1.1
PDLIM5Q96HC4 LINC01529-204ENST00000636474 1715 ntBASIC21.92■■□□□ 1.1
PDLIM5Q96HC4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDLIM5Q96HC4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDLIM5Q96HC4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.92■■□□□ 1.1
PDLIM5Q96HC4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PDLIM5Q96HC4 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.92■■□□□ 1.1
PDLIM5Q96HC4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PDLIM5Q96HC4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.92■■□□□ 1.1
PDLIM5Q96HC4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDLIM5Q96HC4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDLIM5Q96HC4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
PDLIM5Q96HC4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.91■■□□□ 1.1
PDLIM5Q96HC4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.91■■□□□ 1.1
PDLIM5Q96HC4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
PDLIM5Q96HC4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDLIM5Q96HC4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDLIM5Q96HC4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.91■■□□□ 1.1
PDLIM5Q96HC4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDLIM5Q96HC4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDLIM5Q96HC4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.91■■□□□ 1.1
PDLIM5Q96HC4 AC009102.2-201ENST00000606772 1639 ntBASIC21.91■■□□□ 1.1
PDLIM5Q96HC4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDLIM5Q96HC4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
PDLIM5Q96HC4 C1orf229-201ENST00000623686 2258 ntBASIC21.9■■□□□ 1.1
PDLIM5Q96HC4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDLIM5Q96HC4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.9■■□□□ 1.1
PDLIM5Q96HC4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDLIM5Q96HC4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.9■■□□□ 1.1
PDLIM5Q96HC4 TSPY9P-201ENST00000440215 945 ntBASIC21.9■■□□□ 1.1
PDLIM5Q96HC4 TSPY11P-201ENST00000442607 1045 ntBASIC21.9■■□□□ 1.1
PDLIM5Q96HC4 UNC93B8-201ENST00000511903 705 ntBASIC21.9■■□□□ 1.1
PDLIM5Q96HC4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.9■■□□□ 1.1
PDLIM5Q96HC4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.9■■□□□ 1.1
PDLIM5Q96HC4 AL035685.1-201ENST00000636663 812 ntBASIC21.9■■□□□ 1.1
PDLIM5Q96HC4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDLIM5Q96HC4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDLIM5Q96HC4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
PDLIM5Q96HC4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.9■■□□□ 1.1
PDLIM5Q96HC4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
PDLIM5Q96HC4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PDLIM5Q96HC4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
PDLIM5Q96HC4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PDLIM5Q96HC4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.89■■□□□ 1.1
PDLIM5Q96HC4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PDLIM5Q96HC4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PDLIM5Q96HC4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.89■■□□□ 1.09
PDLIM5Q96HC4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDLIM5Q96HC4 DUX4L4-201ENST00000566884 1269 ntBASIC21.89■■□□□ 1.09
PDLIM5Q96HC4 MIR6724-1-201ENST00000616420 92 ntBASIC21.89■■□□□ 1.09
PDLIM5Q96HC4 MIR6724-2-201ENST00000616483 92 ntBASIC21.89■■□□□ 1.09
PDLIM5Q96HC4 MIR6724-4-201ENST00000617390 92 ntBASIC21.89■■□□□ 1.09
PDLIM5Q96HC4 MIR6724-3-201ENST00000622482 92 ntBASIC21.89■■□□□ 1.09
PDLIM5Q96HC4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDLIM5Q96HC4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
PDLIM5Q96HC4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDLIM5Q96HC4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDLIM5Q96HC4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDLIM5Q96HC4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDLIM5Q96HC4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.88■■□□□ 1.09
PDLIM5Q96HC4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.88■■□□□ 1.09
PDLIM5Q96HC4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PDLIM5Q96HC4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.88■■□□□ 1.09
PDLIM5Q96HC4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.88■■□□□ 1.09
PDLIM5Q96HC4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
PDLIM5Q96HC4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.87■■□□□ 1.09
PDLIM5Q96HC4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.87■■□□□ 1.09
PDLIM5Q96HC4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms