Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
SLC47A1Q96FL8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC47A1Q96FL8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC47A1Q96FL8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC47A1Q96FL8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC47A1Q96FL8 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.07■□□□□ 0.96
SLC47A1Q96FL8 BHLHE23-202ENST00000612929 1109 ntBASIC21.07■□□□□ 0.96
SLC47A1Q96FL8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC47A1Q96FL8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC47A1Q96FL8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.07■□□□□ 0.96
SLC47A1Q96FL8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.07■□□□□ 0.96
SLC47A1Q96FL8 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC47A1Q96FL8 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC47A1Q96FL8 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC47A1Q96FL8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC47A1Q96FL8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC47A1Q96FL8 ESRRAP2-201ENST00000418437 1549 ntBASIC21.06■□□□□ 0.96
SLC47A1Q96FL8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC47A1Q96FL8 AC004987.1-201ENST00000428627 508 ntBASIC21.06■□□□□ 0.96
SLC47A1Q96FL8 ATP5G2P3-201ENST00000429083 425 ntBASIC21.06■□□□□ 0.96
SLC47A1Q96FL8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SLC47A1Q96FL8 AC011551.1-201ENST00000614101 683 ntBASIC21.06■□□□□ 0.96
SLC47A1Q96FL8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.06■□□□□ 0.96
SLC47A1Q96FL8 PKD1P6-201ENST00000343738 4769 ntBASIC21.06■□□□□ 0.96
SLC47A1Q96FL8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SLC47A1Q96FL8 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC47A1Q96FL8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SLC47A1Q96FL8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.05■□□□□ 0.96
SLC47A1Q96FL8 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC47A1Q96FL8 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.05■□□□□ 0.96
SLC47A1Q96FL8 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SLC47A1Q96FL8 AC074183.2-201ENST00000623112 922 ntBASIC21.05■□□□□ 0.96
SLC47A1Q96FL8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.05■□□□□ 0.96
SLC47A1Q96FL8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.04■□□□□ 0.96
SLC47A1Q96FL8 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SLC47A1Q96FL8 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC47A1Q96FL8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.04■□□□□ 0.96
SLC47A1Q96FL8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.04■□□□□ 0.96
SLC47A1Q96FL8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC47A1Q96FL8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC47A1Q96FL8 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.03■□□□□ 0.96
SLC47A1Q96FL8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC47A1Q96FL8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC47A1Q96FL8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
SLC47A1Q96FL8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
SLC47A1Q96FL8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
SLC47A1Q96FL8 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC47A1Q96FL8 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC47A1Q96FL8 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.03■□□□□ 0.96
SLC47A1Q96FL8 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.03■□□□□ 0.96
SLC47A1Q96FL8 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC47A1Q96FL8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC47A1Q96FL8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.03■□□□□ 0.96
SLC47A1Q96FL8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC47A1Q96FL8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC47A1Q96FL8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC47A1Q96FL8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC47A1Q96FL8 TSPY13P-201ENST00000338964 914 ntBASIC21.02■□□□□ 0.96
SLC47A1Q96FL8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC47A1Q96FL8 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC47A1Q96FL8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.02■□□□□ 0.96
SLC47A1Q96FL8 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SLC47A1Q96FL8 AC007375.3-201ENST00000600936 2314 ntBASIC21.02■□□□□ 0.96
SLC47A1Q96FL8 AC131274.2-201ENST00000580697 1507 ntBASIC21.02■□□□□ 0.96
SLC47A1Q96FL8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SLC47A1Q96FL8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC47A1Q96FL8 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
SLC47A1Q96FL8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC47A1Q96FL8 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC47A1Q96FL8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.95
SLC47A1Q96FL8 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SLC47A1Q96FL8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SLC47A1Q96FL8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SLC47A1Q96FL8 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC47A1Q96FL8 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC47A1Q96FL8 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC47A1Q96FL8 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SLC47A1Q96FL8 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SLC47A1Q96FL8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC47A1Q96FL8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.01■□□□□ 0.95
SLC47A1Q96FL8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC47A1Q96FL8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.01■□□□□ 0.95
SLC47A1Q96FL8 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.01■□□□□ 0.95
SLC47A1Q96FL8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SLC47A1Q96FL8 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC47A1Q96FL8 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC47A1Q96FL8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SLC47A1Q96FL8 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC47A1Q96FL8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21■□□□□ 0.95
SLC47A1Q96FL8 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21■□□□□ 0.95
SLC47A1Q96FL8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC47A1Q96FL8 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21■□□□□ 0.95
SLC47A1Q96FL8 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC47A1Q96FL8 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC47A1Q96FL8 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SLC47A1Q96FL8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC47A1Q96FL8 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC47A1Q96FL8 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC47A1Q96FL8 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC47A1Q96FL8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms