Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT9Q92600 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT9Q92600 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.62■□□□□ 0.89
CNOT9Q92600 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT9Q92600 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT9Q92600 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT9Q92600 TSPY9P-201ENST00000440215 945 ntBASIC20.62■□□□□ 0.89
CNOT9Q92600 TSPY11P-201ENST00000442607 1045 ntBASIC20.62■□□□□ 0.89
CNOT9Q92600 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.62■□□□□ 0.89
CNOT9Q92600 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.62■□□□□ 0.89
CNOT9Q92600 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT9Q92600 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT9Q92600 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT9Q92600 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT9Q92600 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT9Q92600 MTDHP2-201ENST00000601468 714 ntBASIC20.61■□□□□ 0.89
CNOT9Q92600 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.61■□□□□ 0.89
CNOT9Q92600 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CNOT9Q92600 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.61■□□□□ 0.89
CNOT9Q92600 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT9Q92600 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT9Q92600 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT9Q92600 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.6■□□□□ 0.89
CNOT9Q92600 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CNOT9Q92600 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.6■□□□□ 0.89
CNOT9Q92600 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.6■□□□□ 0.89
CNOT9Q92600 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT9Q92600 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
CNOT9Q92600 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.6■□□□□ 0.89
CNOT9Q92600 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.6■□□□□ 0.89
CNOT9Q92600 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT9Q92600 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT9Q92600 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT9Q92600 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT9Q92600 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNOT9Q92600 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNOT9Q92600 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CNOT9Q92600 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.59■□□□□ 0.89
CNOT9Q92600 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNOT9Q92600 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNOT9Q92600 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNOT9Q92600 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNOT9Q92600 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNOT9Q92600 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CNOT9Q92600 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNOT9Q92600 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.58■□□□□ 0.89
CNOT9Q92600 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CNOT9Q92600 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNOT9Q92600 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNOT9Q92600 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.58■□□□□ 0.89
CNOT9Q92600 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CNOT9Q92600 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.58■□□□□ 0.89
CNOT9Q92600 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNOT9Q92600 AC010997.5-201ENST00000609182 354 ntBASIC20.58■□□□□ 0.89
CNOT9Q92600 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
CNOT9Q92600 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
CNOT9Q92600 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.58■□□□□ 0.88
CNOT9Q92600 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.58■□□□□ 0.88
CNOT9Q92600 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CNOT9Q92600 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CNOT9Q92600 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.57■□□□□ 0.88
CNOT9Q92600 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CNOT9Q92600 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNOT9Q92600 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNOT9Q92600 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNOT9Q92600 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.57■□□□□ 0.88
CNOT9Q92600 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CNOT9Q92600 AL035685.1-201ENST00000636663 812 ntBASIC20.57■□□□□ 0.88
CNOT9Q92600 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNOT9Q92600 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.57■□□□□ 0.88
CNOT9Q92600 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNOT9Q92600 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNOT9Q92600 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.57■□□□□ 0.88
CNOT9Q92600 AL353803.4-201ENST00000565882 1934 ntBASIC20.57■□□□□ 0.88
CNOT9Q92600 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.56■□□□□ 0.88
CNOT9Q92600 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
CNOT9Q92600 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT9Q92600 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT9Q92600 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.56■□□□□ 0.88
CNOT9Q92600 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.56■□□□□ 0.88
CNOT9Q92600 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.56■□□□□ 0.88
CNOT9Q92600 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
CNOT9Q92600 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.56■□□□□ 0.88
CNOT9Q92600 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.56■□□□□ 0.88
CNOT9Q92600 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.55■□□□□ 0.88
CNOT9Q92600 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNOT9Q92600 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.55■□□□□ 0.88
CNOT9Q92600 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CNOT9Q92600 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
CNOT9Q92600 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.55■□□□□ 0.88
CNOT9Q92600 UNC93B8-201ENST00000511903 705 ntBASIC20.55■□□□□ 0.88
CNOT9Q92600 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNOT9Q92600 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNOT9Q92600 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CNOT9Q92600 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNOT9Q92600 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CNOT9Q92600 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.54■□□□□ 0.88
CNOT9Q92600 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.54■□□□□ 0.88
CNOT9Q92600 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNOT9Q92600 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms