Protein–RNA interactions for Protein: Q8WZ73

RFFL, E3 ubiquitin-protein ligase rififylin, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFFLQ8WZ73 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
RFFLQ8WZ73 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.78■■□□□ 1.4
RFFLQ8WZ73 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RFFLQ8WZ73 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
RFFLQ8WZ73 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RFFLQ8WZ73 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
RFFLQ8WZ73 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
RFFLQ8WZ73 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.77■■□□□ 1.4
RFFLQ8WZ73 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RFFLQ8WZ73 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RFFLQ8WZ73 AC019069.1-201ENST00000610008 1333 ntBASIC23.77■■□□□ 1.4
RFFLQ8WZ73 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
RFFLQ8WZ73 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RFFLQ8WZ73 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
RFFLQ8WZ73 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RFFLQ8WZ73 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RFFLQ8WZ73 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RFFLQ8WZ73 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
RFFLQ8WZ73 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RFFLQ8WZ73 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RFFLQ8WZ73 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RFFLQ8WZ73 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.75■■□□□ 1.39
RFFLQ8WZ73 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.75■■□□□ 1.39
RFFLQ8WZ73 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RFFLQ8WZ73 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RFFLQ8WZ73 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RFFLQ8WZ73 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.75■■□□□ 1.39
RFFLQ8WZ73 AC131212.1-201ENST00000613771 668 ntBASIC23.75■■□□□ 1.39
RFFLQ8WZ73 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.75■■□□□ 1.39
RFFLQ8WZ73 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RFFLQ8WZ73 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RFFLQ8WZ73 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
RFFLQ8WZ73 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RFFLQ8WZ73 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RFFLQ8WZ73 SNX5-217ENST00000606557 1087 ntBASIC23.74■■□□□ 1.39
RFFLQ8WZ73 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RFFLQ8WZ73 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.74■■□□□ 1.39
RFFLQ8WZ73 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
RFFLQ8WZ73 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RFFLQ8WZ73 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.73■■□□□ 1.39
RFFLQ8WZ73 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RFFLQ8WZ73 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RFFLQ8WZ73 AL353803.4-201ENST00000565882 1934 ntBASIC23.73■■□□□ 1.39
RFFLQ8WZ73 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
RFFLQ8WZ73 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
RFFLQ8WZ73 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RFFLQ8WZ73 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.73■■□□□ 1.39
RFFLQ8WZ73 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.73■■□□□ 1.39
RFFLQ8WZ73 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.73■■□□□ 1.39
RFFLQ8WZ73 ECEL1P1-201ENST00000373592 1742 ntBASIC23.73■■□□□ 1.39
RFFLQ8WZ73 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
RFFLQ8WZ73 LINC00526-201ENST00000581067 1875 ntBASIC23.73■■□□□ 1.39
RFFLQ8WZ73 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
RFFLQ8WZ73 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RFFLQ8WZ73 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RFFLQ8WZ73 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.72■■□□□ 1.39
RFFLQ8WZ73 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RFFLQ8WZ73 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
RFFLQ8WZ73 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.72■■□□□ 1.39
RFFLQ8WZ73 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
RFFLQ8WZ73 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RFFLQ8WZ73 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RFFLQ8WZ73 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RFFLQ8WZ73 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
RFFLQ8WZ73 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RFFLQ8WZ73 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
RFFLQ8WZ73 ESRRAP2-201ENST00000418437 1549 ntBASIC23.71■■□□□ 1.39
RFFLQ8WZ73 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RFFLQ8WZ73 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RFFLQ8WZ73 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RFFLQ8WZ73 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.71■■□□□ 1.39
RFFLQ8WZ73 AC103724.3-201ENST00000564481 992 ntBASIC23.71■■□□□ 1.39
RFFLQ8WZ73 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RFFLQ8WZ73 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.71■■□□□ 1.39
RFFLQ8WZ73 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
RFFLQ8WZ73 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.7■■□□□ 1.39
RFFLQ8WZ73 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RFFLQ8WZ73 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
RFFLQ8WZ73 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RFFLQ8WZ73 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
RFFLQ8WZ73 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.7■■□□□ 1.38
RFFLQ8WZ73 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RFFLQ8WZ73 AL031848.2-201ENST00000607670 837 ntBASIC23.7■■□□□ 1.38
RFFLQ8WZ73 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.7■■□□□ 1.38
RFFLQ8WZ73 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.7■■□□□ 1.38
RFFLQ8WZ73 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
RFFLQ8WZ73 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RFFLQ8WZ73 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.69■■□□□ 1.38
RFFLQ8WZ73 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.69■■□□□ 1.38
RFFLQ8WZ73 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RFFLQ8WZ73 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
RFFLQ8WZ73 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.69■■□□□ 1.38
RFFLQ8WZ73 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.69■■□□□ 1.38
RFFLQ8WZ73 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RFFLQ8WZ73 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
RFFLQ8WZ73 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RFFLQ8WZ73 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
RFFLQ8WZ73 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.69■■□□□ 1.38
RFFLQ8WZ73 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.69■■□□□ 1.38
RFFLQ8WZ73 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms