Protein–RNA interactions for Protein: Q8WVM8

SCFD1, Sec1 family domain-containing protein 1, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1Q8WVM8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.55
SCFD1Q8WVM8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
SCFD1Q8WVM8 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SCFD1Q8WVM8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
SCFD1Q8WVM8 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.7■■□□□ 1.54
SCFD1Q8WVM8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC24.7■■□□□ 1.54
SCFD1Q8WVM8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SCFD1Q8WVM8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SCFD1Q8WVM8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.69■■□□□ 1.54
SCFD1Q8WVM8 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SCFD1Q8WVM8 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SCFD1Q8WVM8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SCFD1Q8WVM8 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SCFD1Q8WVM8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.69■■□□□ 1.54
SCFD1Q8WVM8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC24.69■■□□□ 1.54
SCFD1Q8WVM8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
SCFD1Q8WVM8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SCFD1Q8WVM8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
SCFD1Q8WVM8 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.69■■□□□ 1.54
SCFD1Q8WVM8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SCFD1Q8WVM8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.69■■□□□ 1.54
SCFD1Q8WVM8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SCFD1Q8WVM8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SCFD1Q8WVM8 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
SCFD1Q8WVM8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SCFD1Q8WVM8 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.69■■□□□ 1.54
SCFD1Q8WVM8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC24.68■■□□□ 1.54
SCFD1Q8WVM8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.68■■□□□ 1.54
SCFD1Q8WVM8 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.68■■□□□ 1.54
SCFD1Q8WVM8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.68■■□□□ 1.54
SCFD1Q8WVM8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SCFD1Q8WVM8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.67■■□□□ 1.54
SCFD1Q8WVM8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
SCFD1Q8WVM8 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
SCFD1Q8WVM8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SCFD1Q8WVM8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SCFD1Q8WVM8 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.67■■□□□ 1.54
SCFD1Q8WVM8 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
SCFD1Q8WVM8 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SCFD1Q8WVM8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SCFD1Q8WVM8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SCFD1Q8WVM8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SCFD1Q8WVM8 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
SCFD1Q8WVM8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.66■■□□□ 1.54
SCFD1Q8WVM8 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SCFD1Q8WVM8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC24.66■■□□□ 1.54
SCFD1Q8WVM8 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SCFD1Q8WVM8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SCFD1Q8WVM8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SCFD1Q8WVM8 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
SCFD1Q8WVM8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC24.65■■□□□ 1.54
SCFD1Q8WVM8 AL356441.2-201ENST00000443009 864 ntBASIC24.65■■□□□ 1.54
SCFD1Q8WVM8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.65■■□□□ 1.54
SCFD1Q8WVM8 AL117332.1-201ENST00000622628 974 ntBASIC24.65■■□□□ 1.54
SCFD1Q8WVM8 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SCFD1Q8WVM8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.65■■□□□ 1.54
SCFD1Q8WVM8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.64■■□□□ 1.54
SCFD1Q8WVM8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.64■■□□□ 1.54
SCFD1Q8WVM8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SCFD1Q8WVM8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SCFD1Q8WVM8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.64■■□□□ 1.54
SCFD1Q8WVM8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SCFD1Q8WVM8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC24.64■■□□□ 1.53
SCFD1Q8WVM8 C17orf82-201ENST00000623772 1530 ntBASIC24.64■■□□□ 1.53
SCFD1Q8WVM8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SCFD1Q8WVM8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
SCFD1Q8WVM8 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
SCFD1Q8WVM8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
SCFD1Q8WVM8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.63■■□□□ 1.53
SCFD1Q8WVM8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
SCFD1Q8WVM8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.62■■□□□ 1.53
SCFD1Q8WVM8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SCFD1Q8WVM8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SCFD1Q8WVM8 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.62■■□□□ 1.53
SCFD1Q8WVM8 MIR3621-201ENST00000580529 85 ntBASIC24.62■■□□□ 1.53
SCFD1Q8WVM8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC24.62■■□□□ 1.53
SCFD1Q8WVM8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.62■■□□□ 1.53
SCFD1Q8WVM8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SCFD1Q8WVM8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
SCFD1Q8WVM8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
SCFD1Q8WVM8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.61■■□□□ 1.53
SCFD1Q8WVM8 AC012676.1-201ENST00000574705 1949 ntBASIC24.61■■□□□ 1.53
SCFD1Q8WVM8 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SCFD1Q8WVM8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SCFD1Q8WVM8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
SCFD1Q8WVM8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SCFD1Q8WVM8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC24.61■■□□□ 1.53
SCFD1Q8WVM8 FP325331.1-202ENST00000623531 1380 ntBASIC24.61■■□□□ 1.53
SCFD1Q8WVM8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
SCFD1Q8WVM8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
SCFD1Q8WVM8 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
SCFD1Q8WVM8 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SCFD1Q8WVM8 LINC01529-204ENST00000636474 1715 ntBASIC24.61■■□□□ 1.53
SCFD1Q8WVM8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.61■■□□□ 1.53
SCFD1Q8WVM8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SCFD1Q8WVM8 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
SCFD1Q8WVM8 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SCFD1Q8WVM8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SCFD1Q8WVM8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.6■■□□□ 1.53
SCFD1Q8WVM8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms