Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RDH11Q8TC12 AC004987.1-201ENST00000428627 508 ntBASIC22.06■■□□□ 1.12
RDH11Q8TC12 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
RDH11Q8TC12 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
RDH11Q8TC12 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
RDH11Q8TC12 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RDH11Q8TC12 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RDH11Q8TC12 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.06■■□□□ 1.12
RDH11Q8TC12 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.06■■□□□ 1.12
RDH11Q8TC12 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RDH11Q8TC12 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.05■■□□□ 1.12
RDH11Q8TC12 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RDH11Q8TC12 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RDH11Q8TC12 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RDH11Q8TC12 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.05■■□□□ 1.12
RDH11Q8TC12 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
RDH11Q8TC12 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
RDH11Q8TC12 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RDH11Q8TC12 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.04■■□□□ 1.12
RDH11Q8TC12 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
RDH11Q8TC12 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RDH11Q8TC12 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RDH11Q8TC12 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.04■■□□□ 1.12
RDH11Q8TC12 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.04■■□□□ 1.12
RDH11Q8TC12 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
RDH11Q8TC12 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.04■■□□□ 1.12
RDH11Q8TC12 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
RDH11Q8TC12 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
RDH11Q8TC12 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RDH11Q8TC12 AL353803.4-201ENST00000565882 1934 ntBASIC22.04■■□□□ 1.12
RDH11Q8TC12 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.04■■□□□ 1.12
RDH11Q8TC12 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RDH11Q8TC12 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
RDH11Q8TC12 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RDH11Q8TC12 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
RDH11Q8TC12 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.03■■□□□ 1.12
RDH11Q8TC12 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
RDH11Q8TC12 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RDH11Q8TC12 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RDH11Q8TC12 ATP5G2P3-201ENST00000429083 425 ntBASIC22.03■■□□□ 1.12
RDH11Q8TC12 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.03■■□□□ 1.12
RDH11Q8TC12 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RDH11Q8TC12 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
RDH11Q8TC12 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.03■■□□□ 1.12
RDH11Q8TC12 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
RDH11Q8TC12 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.02■■□□□ 1.12
RDH11Q8TC12 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
RDH11Q8TC12 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.12
RDH11Q8TC12 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RDH11Q8TC12 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RDH11Q8TC12 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.02■■□□□ 1.12
RDH11Q8TC12 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.02■■□□□ 1.12
RDH11Q8TC12 BHLHE23-202ENST00000612929 1109 ntBASIC22.02■■□□□ 1.12
RDH11Q8TC12 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RDH11Q8TC12 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RDH11Q8TC12 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RDH11Q8TC12 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RDH11Q8TC12 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RDH11Q8TC12 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
RDH11Q8TC12 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RDH11Q8TC12 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RDH11Q8TC12 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RDH11Q8TC12 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
RDH11Q8TC12 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RDH11Q8TC12 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RDH11Q8TC12 TSPY13P-201ENST00000338964 914 ntBASIC22.01■■□□□ 1.11
RDH11Q8TC12 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.01■■□□□ 1.11
RDH11Q8TC12 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
RDH11Q8TC12 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.01■■□□□ 1.11
RDH11Q8TC12 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
RDH11Q8TC12 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
RDH11Q8TC12 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22■■□□□ 1.11
RDH11Q8TC12 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22■■□□□ 1.11
RDH11Q8TC12 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RDH11Q8TC12 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22■■□□□ 1.11
RDH11Q8TC12 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22■■□□□ 1.11
RDH11Q8TC12 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
RDH11Q8TC12 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22■■□□□ 1.11
RDH11Q8TC12 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RDH11Q8TC12 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RDH11Q8TC12 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RDH11Q8TC12 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
RDH11Q8TC12 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.99■■□□□ 1.11
RDH11Q8TC12 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RDH11Q8TC12 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RDH11Q8TC12 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RDH11Q8TC12 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.99■■□□□ 1.11
RDH11Q8TC12 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RDH11Q8TC12 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RDH11Q8TC12 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RDH11Q8TC12 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.99■■□□□ 1.11
RDH11Q8TC12 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
RDH11Q8TC12 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RDH11Q8TC12 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
RDH11Q8TC12 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.98■■□□□ 1.11
RDH11Q8TC12 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RDH11Q8TC12 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
RDH11Q8TC12 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
RDH11Q8TC12 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.98■■□□□ 1.11
RDH11Q8TC12 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms