Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNIP1Q8TAD8 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNIP1Q8TAD8 AL121749.1-202ENST00000609313 2153 ntBASIC21.2■□□□□ 0.98
SNIP1Q8TAD8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNIP1Q8TAD8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNIP1Q8TAD8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SNIP1Q8TAD8 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.2■□□□□ 0.98
SNIP1Q8TAD8 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNIP1Q8TAD8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SNIP1Q8TAD8 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.2■□□□□ 0.98
SNIP1Q8TAD8 AC016769.1-201ENST00000409132 1010 ntBASIC21.2■□□□□ 0.98
SNIP1Q8TAD8 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNIP1Q8TAD8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.2■□□□□ 0.98
SNIP1Q8TAD8 MIR6089-201ENST00000616698 64 ntBASIC21.2■□□□□ 0.98
SNIP1Q8TAD8 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.2■□□□□ 0.98
SNIP1Q8TAD8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.2■□□□□ 0.98
SNIP1Q8TAD8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNIP1Q8TAD8 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNIP1Q8TAD8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SNIP1Q8TAD8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.19■□□□□ 0.98
SNIP1Q8TAD8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.19■□□□□ 0.98
SNIP1Q8TAD8 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNIP1Q8TAD8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SNIP1Q8TAD8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SNIP1Q8TAD8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SNIP1Q8TAD8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.18■□□□□ 0.98
SNIP1Q8TAD8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNIP1Q8TAD8 AC026185.1-201ENST00000445748 174 ntBASIC21.18■□□□□ 0.98
SNIP1Q8TAD8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.18■□□□□ 0.98
SNIP1Q8TAD8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SNIP1Q8TAD8 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.18■□□□□ 0.98
SNIP1Q8TAD8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNIP1Q8TAD8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNIP1Q8TAD8 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SNIP1Q8TAD8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.18■□□□□ 0.98
SNIP1Q8TAD8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNIP1Q8TAD8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.18■□□□□ 0.98
SNIP1Q8TAD8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.17■□□□□ 0.98
SNIP1Q8TAD8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SNIP1Q8TAD8 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.17■□□□□ 0.98
SNIP1Q8TAD8 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.17■□□□□ 0.98
SNIP1Q8TAD8 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.17■□□□□ 0.98
SNIP1Q8TAD8 AC137761.2-201ENST00000561729 223 ntBASIC21.17■□□□□ 0.98
SNIP1Q8TAD8 AC145350.3-201ENST00000569033 163 ntBASIC21.17■□□□□ 0.98
SNIP1Q8TAD8 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SNIP1Q8TAD8 TMEM191A-211ENST00000637163 1067 ntBASIC21.17■□□□□ 0.98
SNIP1Q8TAD8 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.17■□□□□ 0.98
SNIP1Q8TAD8 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.17■□□□□ 0.98
SNIP1Q8TAD8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNIP1Q8TAD8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SNIP1Q8TAD8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
SNIP1Q8TAD8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNIP1Q8TAD8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.16■□□□□ 0.98
SNIP1Q8TAD8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNIP1Q8TAD8 AC133637.1-201ENST00000624115 1537 ntBASIC21.16■□□□□ 0.98
SNIP1Q8TAD8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.16■□□□□ 0.98
SNIP1Q8TAD8 AL161729.1-201ENST00000604104 1402 ntBASIC21.16■□□□□ 0.98
SNIP1Q8TAD8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNIP1Q8TAD8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNIP1Q8TAD8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SNIP1Q8TAD8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.15■□□□□ 0.98
SNIP1Q8TAD8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNIP1Q8TAD8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SNIP1Q8TAD8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNIP1Q8TAD8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.15■□□□□ 0.98
SNIP1Q8TAD8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.15■□□□□ 0.98
SNIP1Q8TAD8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNIP1Q8TAD8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNIP1Q8TAD8 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNIP1Q8TAD8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNIP1Q8TAD8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
SNIP1Q8TAD8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SNIP1Q8TAD8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SNIP1Q8TAD8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
SNIP1Q8TAD8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SNIP1Q8TAD8 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNIP1Q8TAD8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNIP1Q8TAD8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNIP1Q8TAD8 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.14■□□□□ 0.97
SNIP1Q8TAD8 OR2I1P-207ENST00000453522 948 ntBASIC21.14■□□□□ 0.97
SNIP1Q8TAD8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SNIP1Q8TAD8 KRT18P61-201ENST00000585825 1298 ntBASIC21.14■□□□□ 0.97
SNIP1Q8TAD8 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.14■□□□□ 0.97
SNIP1Q8TAD8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNIP1Q8TAD8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.14■□□□□ 0.97
SNIP1Q8TAD8 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
SNIP1Q8TAD8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.13■□□□□ 0.97
SNIP1Q8TAD8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.13■□□□□ 0.97
SNIP1Q8TAD8 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.13■□□□□ 0.97
SNIP1Q8TAD8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SNIP1Q8TAD8 AL355802.2-201ENST00000402069 882 ntBASIC21.13■□□□□ 0.97
SNIP1Q8TAD8 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.13■□□□□ 0.97
SNIP1Q8TAD8 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.13■□□□□ 0.97
SNIP1Q8TAD8 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SNIP1Q8TAD8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.13■□□□□ 0.97
SNIP1Q8TAD8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.13■□□□□ 0.97
SNIP1Q8TAD8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNIP1Q8TAD8 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.13■□□□□ 0.97
SNIP1Q8TAD8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SNIP1Q8TAD8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms