Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH19Q8TAB3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH19Q8TAB3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDH19Q8TAB3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDH19Q8TAB3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDH19Q8TAB3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
PCDH19Q8TAB3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDH19Q8TAB3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDH19Q8TAB3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDH19Q8TAB3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDH19Q8TAB3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH19Q8TAB3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
PCDH19Q8TAB3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDH19Q8TAB3 AL353803.4-201ENST00000565882 1934 ntBASIC23.18■■□□□ 1.3
PCDH19Q8TAB3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH19Q8TAB3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH19Q8TAB3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.18■■□□□ 1.3
PCDH19Q8TAB3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH19Q8TAB3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDH19Q8TAB3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH19Q8TAB3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDH19Q8TAB3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.17■■□□□ 1.3
PCDH19Q8TAB3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
PCDH19Q8TAB3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH19Q8TAB3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.17■■□□□ 1.3
PCDH19Q8TAB3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.17■■□□□ 1.3
PCDH19Q8TAB3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
PCDH19Q8TAB3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH19Q8TAB3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH19Q8TAB3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
PCDH19Q8TAB3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDH19Q8TAB3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDH19Q8TAB3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDH19Q8TAB3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDH19Q8TAB3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDH19Q8TAB3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDH19Q8TAB3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.16■■□□□ 1.3
PCDH19Q8TAB3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
PCDH19Q8TAB3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
PCDH19Q8TAB3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.15■■□□□ 1.3
PCDH19Q8TAB3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
PCDH19Q8TAB3 AC144652.1-201ENST00000609974 1624 ntBASIC23.15■■□□□ 1.3
PCDH19Q8TAB3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
PCDH19Q8TAB3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDH19Q8TAB3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
PCDH19Q8TAB3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDH19Q8TAB3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDH19Q8TAB3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.14■■□□□ 1.3
PCDH19Q8TAB3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDH19Q8TAB3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDH19Q8TAB3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.14■■□□□ 1.29
PCDH19Q8TAB3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.14■■□□□ 1.29
PCDH19Q8TAB3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PCDH19Q8TAB3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.14■■□□□ 1.29
PCDH19Q8TAB3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDH19Q8TAB3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.13■■□□□ 1.29
PCDH19Q8TAB3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDH19Q8TAB3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
PCDH19Q8TAB3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDH19Q8TAB3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.13■■□□□ 1.29
PCDH19Q8TAB3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDH19Q8TAB3 KRT16P3-201ENST00000439127 1283 ntBASIC23.13■■□□□ 1.29
PCDH19Q8TAB3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
PCDH19Q8TAB3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.13■■□□□ 1.29
PCDH19Q8TAB3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDH19Q8TAB3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
PCDH19Q8TAB3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDH19Q8TAB3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDH19Q8TAB3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH19Q8TAB3 AC009102.2-201ENST00000606772 1639 ntBASIC23.12■■□□□ 1.29
PCDH19Q8TAB3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH19Q8TAB3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.12■■□□□ 1.29
PCDH19Q8TAB3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
PCDH19Q8TAB3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH19Q8TAB3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
PCDH19Q8TAB3 C1orf229-201ENST00000623686 2258 ntBASIC23.11■■□□□ 1.29
PCDH19Q8TAB3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDH19Q8TAB3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.11■■□□□ 1.29
PCDH19Q8TAB3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.11■■□□□ 1.29
PCDH19Q8TAB3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.11■■□□□ 1.29
PCDH19Q8TAB3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.11■■□□□ 1.29
PCDH19Q8TAB3 MIR6724-1-201ENST00000616420 92 ntBASIC23.11■■□□□ 1.29
PCDH19Q8TAB3 MIR6724-2-201ENST00000616483 92 ntBASIC23.11■■□□□ 1.29
PCDH19Q8TAB3 MIR6724-4-201ENST00000617390 92 ntBASIC23.11■■□□□ 1.29
PCDH19Q8TAB3 MIR6724-3-201ENST00000622482 92 ntBASIC23.11■■□□□ 1.29
PCDH19Q8TAB3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.11■■□□□ 1.29
PCDH19Q8TAB3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.11■■□□□ 1.29
PCDH19Q8TAB3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
PCDH19Q8TAB3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDH19Q8TAB3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDH19Q8TAB3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH19Q8TAB3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.1■■□□□ 1.29
PCDH19Q8TAB3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
PCDH19Q8TAB3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH19Q8TAB3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
PCDH19Q8TAB3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.1■■□□□ 1.29
PCDH19Q8TAB3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH19Q8TAB3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.1■■□□□ 1.29
PCDH19Q8TAB3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.1■■□□□ 1.29
PCDH19Q8TAB3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms