Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SHCBP1Q8NEM2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SHCBP1Q8NEM2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC25.68■■□□□ 1.7
SHCBP1Q8NEM2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC25.68■■□□□ 1.7
SHCBP1Q8NEM2 IKBKGP1-201ENST00000612193 1073 ntBASIC25.68■■□□□ 1.7
SHCBP1Q8NEM2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
SHCBP1Q8NEM2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SHCBP1Q8NEM2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
SHCBP1Q8NEM2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC25.67■■□□□ 1.7
SHCBP1Q8NEM2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SHCBP1Q8NEM2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SHCBP1Q8NEM2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
SHCBP1Q8NEM2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC25.67■■□□□ 1.7
SHCBP1Q8NEM2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SHCBP1Q8NEM2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
SHCBP1Q8NEM2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SHCBP1Q8NEM2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SHCBP1Q8NEM2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.67■■□□□ 1.7
SHCBP1Q8NEM2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC25.67■■□□□ 1.7
SHCBP1Q8NEM2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
SHCBP1Q8NEM2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SHCBP1Q8NEM2 MIR6084-201ENST00000622012 110 ntBASIC25.67■■□□□ 1.7
SHCBP1Q8NEM2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
SHCBP1Q8NEM2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC25.67■■□□□ 1.7
SHCBP1Q8NEM2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.67■■□□□ 1.7
SHCBP1Q8NEM2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.66■■□□□ 1.7
SHCBP1Q8NEM2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SHCBP1Q8NEM2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.66■■□□□ 1.7
SHCBP1Q8NEM2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SHCBP1Q8NEM2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SHCBP1Q8NEM2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SHCBP1Q8NEM2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SHCBP1Q8NEM2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SHCBP1Q8NEM2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
SHCBP1Q8NEM2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SHCBP1Q8NEM2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC25.66■■□□□ 1.7
SHCBP1Q8NEM2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SHCBP1Q8NEM2 AC010525.1-201ENST00000585559 441 ntBASIC25.66■■□□□ 1.7
SHCBP1Q8NEM2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC25.66■■□□□ 1.7
SHCBP1Q8NEM2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.65■■□□□ 1.7
SHCBP1Q8NEM2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SHCBP1Q8NEM2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SHCBP1Q8NEM2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC25.65■■□□□ 1.7
SHCBP1Q8NEM2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC25.65■■□□□ 1.7
SHCBP1Q8NEM2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SHCBP1Q8NEM2 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SHCBP1Q8NEM2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC25.64■■□□□ 1.7
SHCBP1Q8NEM2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SHCBP1Q8NEM2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.64■■□□□ 1.7
SHCBP1Q8NEM2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SHCBP1Q8NEM2 AC090192.1-201ENST00000517740 490 ntBASIC25.64■■□□□ 1.7
SHCBP1Q8NEM2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC25.64■■□□□ 1.7
SHCBP1Q8NEM2 AL137784.2-201ENST00000607332 1000 ntBASIC25.64■■□□□ 1.7
SHCBP1Q8NEM2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
SHCBP1Q8NEM2 AC092437.1-201ENST00000624794 1048 ntBASIC25.64■■□□□ 1.7
SHCBP1Q8NEM2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
SHCBP1Q8NEM2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SHCBP1Q8NEM2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
SHCBP1Q8NEM2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.63■■□□□ 1.69
SHCBP1Q8NEM2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SHCBP1Q8NEM2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SHCBP1Q8NEM2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
SHCBP1Q8NEM2 AP005435.1-201ENST00000529293 1178 ntBASIC25.63■■□□□ 1.69
SHCBP1Q8NEM2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SHCBP1Q8NEM2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
SHCBP1Q8NEM2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
SHCBP1Q8NEM2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.63■■□□□ 1.69
SHCBP1Q8NEM2 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SHCBP1Q8NEM2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SHCBP1Q8NEM2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SHCBP1Q8NEM2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SHCBP1Q8NEM2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SHCBP1Q8NEM2 CCDC92B-201ENST00000575506 885 ntBASIC25.62■■□□□ 1.69
SHCBP1Q8NEM2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
SHCBP1Q8NEM2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
SHCBP1Q8NEM2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SHCBP1Q8NEM2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SHCBP1Q8NEM2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC25.61■■□□□ 1.69
SHCBP1Q8NEM2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
SHCBP1Q8NEM2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC25.61■■□□□ 1.69
SHCBP1Q8NEM2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
SHCBP1Q8NEM2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC25.61■■□□□ 1.69
SHCBP1Q8NEM2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC25.6■■□□□ 1.69
SHCBP1Q8NEM2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.6■■□□□ 1.69
SHCBP1Q8NEM2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SHCBP1Q8NEM2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC25.6■■□□□ 1.69
SHCBP1Q8NEM2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC25.6■■□□□ 1.69
SHCBP1Q8NEM2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC25.6■■□□□ 1.69
SHCBP1Q8NEM2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SHCBP1Q8NEM2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
SHCBP1Q8NEM2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC25.6■■□□□ 1.69
SHCBP1Q8NEM2 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SHCBP1Q8NEM2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
SHCBP1Q8NEM2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SHCBP1Q8NEM2 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.59■■□□□ 1.69
SHCBP1Q8NEM2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SHCBP1Q8NEM2 AC135731.1-201ENST00000569415 2548 ntBASIC25.59■■□□□ 1.69
SHCBP1Q8NEM2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SHCBP1Q8NEM2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC25.59■■□□□ 1.69
SHCBP1Q8NEM2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms