Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF439Q8NDP4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.49■□□□□ 0.55
ZNF439Q8NDP4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF439Q8NDP4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.49■□□□□ 0.55
ZNF439Q8NDP4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
ZNF439Q8NDP4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF439Q8NDP4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF439Q8NDP4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.49■□□□□ 0.55
ZNF439Q8NDP4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.49■□□□□ 0.55
ZNF439Q8NDP4 AC068473.5-201ENST00000616428 2072 ntBASIC18.49■□□□□ 0.55
ZNF439Q8NDP4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF439Q8NDP4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF439Q8NDP4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF439Q8NDP4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF439Q8NDP4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF439Q8NDP4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
ZNF439Q8NDP4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF439Q8NDP4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF439Q8NDP4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF439Q8NDP4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
ZNF439Q8NDP4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF439Q8NDP4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ZNF439Q8NDP4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF439Q8NDP4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.48■□□□□ 0.55
ZNF439Q8NDP4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.48■□□□□ 0.55
ZNF439Q8NDP4 AL451085.2-201ENST00000605085 799 ntBASIC18.48■□□□□ 0.55
ZNF439Q8NDP4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF439Q8NDP4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF439Q8NDP4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ZNF439Q8NDP4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF439Q8NDP4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF439Q8NDP4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.47■□□□□ 0.55
ZNF439Q8NDP4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
ZNF439Q8NDP4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF439Q8NDP4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.47■□□□□ 0.55
ZNF439Q8NDP4 AC009299.2-201ENST00000482477 511 ntBASIC18.47■□□□□ 0.55
ZNF439Q8NDP4 AC092028.1-203ENST00000608262 953 ntBASIC18.47■□□□□ 0.55
ZNF439Q8NDP4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF439Q8NDP4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.47■□□□□ 0.55
ZNF439Q8NDP4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.47■□□□□ 0.55
ZNF439Q8NDP4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
ZNF439Q8NDP4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF439Q8NDP4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF439Q8NDP4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.47■□□□□ 0.55
ZNF439Q8NDP4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF439Q8NDP4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF439Q8NDP4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.46■□□□□ 0.55
ZNF439Q8NDP4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF439Q8NDP4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.46■□□□□ 0.55
ZNF439Q8NDP4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF439Q8NDP4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.46■□□□□ 0.55
ZNF439Q8NDP4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.46■□□□□ 0.55
ZNF439Q8NDP4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.46■□□□□ 0.55
ZNF439Q8NDP4 KRT125P-201ENST00000546827 989 ntBASIC18.46■□□□□ 0.55
ZNF439Q8NDP4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.46■□□□□ 0.55
ZNF439Q8NDP4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
ZNF439Q8NDP4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
ZNF439Q8NDP4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF439Q8NDP4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.46■□□□□ 0.55
ZNF439Q8NDP4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF439Q8NDP4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF439Q8NDP4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
ZNF439Q8NDP4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF439Q8NDP4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.45■□□□□ 0.54
ZNF439Q8NDP4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
ZNF439Q8NDP4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF439Q8NDP4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ZNF439Q8NDP4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
ZNF439Q8NDP4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.45■□□□□ 0.54
ZNF439Q8NDP4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.45■□□□□ 0.54
ZNF439Q8NDP4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.45■□□□□ 0.54
ZNF439Q8NDP4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
ZNF439Q8NDP4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF439Q8NDP4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
ZNF439Q8NDP4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF439Q8NDP4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF439Q8NDP4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF439Q8NDP4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF439Q8NDP4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF439Q8NDP4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.44■□□□□ 0.54
ZNF439Q8NDP4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.44■□□□□ 0.54
ZNF439Q8NDP4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
ZNF439Q8NDP4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF439Q8NDP4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF439Q8NDP4 AC012676.1-201ENST00000574705 1949 ntBASIC18.44■□□□□ 0.54
ZNF439Q8NDP4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF439Q8NDP4 AC079630.1-202ENST00000618127 1840 ntBASIC18.44■□□□□ 0.54
ZNF439Q8NDP4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF439Q8NDP4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF439Q8NDP4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
ZNF439Q8NDP4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF439Q8NDP4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF439Q8NDP4 MIR4787-201ENST00000607364 84 ntBASIC18.43■□□□□ 0.54
ZNF439Q8NDP4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF439Q8NDP4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
ZNF439Q8NDP4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF439Q8NDP4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF439Q8NDP4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.42■□□□□ 0.54
ZNF439Q8NDP4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF439Q8NDP4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms