Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC35.52■■■■□ 3.28
CFAP43Q8NDM7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC35.52■■■■□ 3.28
CFAP43Q8NDM7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
CFAP43Q8NDM7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC35.51■■■■□ 3.28
CFAP43Q8NDM7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC35.51■■■■□ 3.28
CFAP43Q8NDM7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC35.51■■■■□ 3.28
CFAP43Q8NDM7 ABHD17AP1-201ENST00000358206 933 ntBASIC35.51■■■■□ 3.28
CFAP43Q8NDM7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC35.51■■■■□ 3.27
CFAP43Q8NDM7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
CFAP43Q8NDM7 IGHV3-19-201ENST00000521488 291 ntBASIC35.5■■■■□ 3.27
CFAP43Q8NDM7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC35.5■■■■□ 3.27
CFAP43Q8NDM7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC35.5■■■■□ 3.27
CFAP43Q8NDM7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
CFAP43Q8NDM7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC35.49■■■■□ 3.27
CFAP43Q8NDM7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC35.49■■■■□ 3.27
CFAP43Q8NDM7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
CFAP43Q8NDM7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC35.49■■■■□ 3.27
CFAP43Q8NDM7 EED-207ENST00000528180 1745 ntTSL 5 BASIC35.49■■■■□ 3.27
CFAP43Q8NDM7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC35.49■■■■□ 3.27
CFAP43Q8NDM7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC35.49■■■■□ 3.27
CFAP43Q8NDM7 TERF1P2-201ENST00000583350 1212 ntBASIC35.49■■■■□ 3.27
CFAP43Q8NDM7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
CFAP43Q8NDM7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC35.47■■■■□ 3.27
CFAP43Q8NDM7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC35.47■■■■□ 3.27
CFAP43Q8NDM7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC35.47■■■■□ 3.27
CFAP43Q8NDM7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC35.47■■■■□ 3.27
CFAP43Q8NDM7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC35.47■■■■□ 3.27
CFAP43Q8NDM7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC35.47■■■■□ 3.27
CFAP43Q8NDM7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC35.46■■■■□ 3.27
CFAP43Q8NDM7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC35.46■■■■□ 3.27
CFAP43Q8NDM7 MIR6084-201ENST00000622012 110 ntBASIC35.46■■■■□ 3.27
CFAP43Q8NDM7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
CFAP43Q8NDM7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
CFAP43Q8NDM7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
CFAP43Q8NDM7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC35.46■■■■□ 3.27
CFAP43Q8NDM7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC35.46■■■■□ 3.27
CFAP43Q8NDM7 RAP2CP1-201ENST00000605103 478 ntBASIC35.46■■■■□ 3.27
CFAP43Q8NDM7 AL354811.1-201ENST00000610286 706 ntBASIC35.46■■■■□ 3.27
CFAP43Q8NDM7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC35.45■■■■□ 3.27
CFAP43Q8NDM7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC35.45■■■■□ 3.27
CFAP43Q8NDM7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC35.45■■■■□ 3.27
CFAP43Q8NDM7 MIR572-201ENST00000384983 95 ntBASIC35.45■■■■□ 3.27
CFAP43Q8NDM7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
CFAP43Q8NDM7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC35.44■■■■□ 3.26
CFAP43Q8NDM7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC35.44■■■■□ 3.26
CFAP43Q8NDM7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC35.44■■■■□ 3.26
CFAP43Q8NDM7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC35.44■■■■□ 3.26
CFAP43Q8NDM7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC35.44■■■■□ 3.26
CFAP43Q8NDM7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC35.44■■■■□ 3.26
CFAP43Q8NDM7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC35.44■■■■□ 3.26
CFAP43Q8NDM7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC35.43■■■■□ 3.26
CFAP43Q8NDM7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC35.43■■■■□ 3.26
CFAP43Q8NDM7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC35.42■■■■□ 3.26
CFAP43Q8NDM7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC35.42■■■■□ 3.26
CFAP43Q8NDM7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC35.42■■■■□ 3.26
CFAP43Q8NDM7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC35.42■■■■□ 3.26
CFAP43Q8NDM7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
CFAP43Q8NDM7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
CFAP43Q8NDM7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC35.41■■■■□ 3.26
CFAP43Q8NDM7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC35.41■■■■□ 3.26
CFAP43Q8NDM7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
CFAP43Q8NDM7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC35.4■■■■□ 3.26
CFAP43Q8NDM7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC35.4■■■■□ 3.26
CFAP43Q8NDM7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC35.4■■■■□ 3.26
CFAP43Q8NDM7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
CFAP43Q8NDM7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
CFAP43Q8NDM7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC35.39■■■■□ 3.26
CFAP43Q8NDM7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
CFAP43Q8NDM7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
CFAP43Q8NDM7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
CFAP43Q8NDM7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC35.39■■■■□ 3.26
CFAP43Q8NDM7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC35.39■■■■□ 3.26
CFAP43Q8NDM7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC35.39■■■■□ 3.26
CFAP43Q8NDM7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC35.39■■■■□ 3.26
CFAP43Q8NDM7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
CFAP43Q8NDM7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC35.39■■■■□ 3.26
CFAP43Q8NDM7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
CFAP43Q8NDM7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
CFAP43Q8NDM7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC35.38■■■■□ 3.25
CFAP43Q8NDM7 GXYLT1P2-201ENST00000433312 1230 ntBASIC35.38■■■■□ 3.25
CFAP43Q8NDM7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC35.38■■■■□ 3.25
CFAP43Q8NDM7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC35.38■■■■□ 3.25
CFAP43Q8NDM7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC35.38■■■■□ 3.25
CFAP43Q8NDM7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC35.38■■■■□ 3.25
CFAP43Q8NDM7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC35.38■■■■□ 3.25
CFAP43Q8NDM7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
CFAP43Q8NDM7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
CFAP43Q8NDM7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC35.37■■■■□ 3.25
CFAP43Q8NDM7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
CFAP43Q8NDM7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
CFAP43Q8NDM7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC35.37■■■■□ 3.25
CFAP43Q8NDM7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC35.37■■■■□ 3.25
CFAP43Q8NDM7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
CFAP43Q8NDM7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC35.37■■■■□ 3.25
CFAP43Q8NDM7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC35.37■■■■□ 3.25
CFAP43Q8NDM7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
CFAP43Q8NDM7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC35.36■■■■□ 3.25
CFAP43Q8NDM7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
CFAP43Q8NDM7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC35.36■■■■□ 3.25
CFAP43Q8NDM7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC35.36■■■■□ 3.25
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms