Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.67■□□□□ 0.42
TMEM116Q8NCL8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.67■□□□□ 0.42
TMEM116Q8NCL8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM116Q8NCL8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TMEM116Q8NCL8 MIR4281-201ENST00000580852 62 ntBASIC17.67■□□□□ 0.42
TMEM116Q8NCL8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.67■□□□□ 0.42
TMEM116Q8NCL8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.67■□□□□ 0.42
TMEM116Q8NCL8 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM116Q8NCL8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM116Q8NCL8 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM116Q8NCL8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.67■□□□□ 0.42
TMEM116Q8NCL8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM116Q8NCL8 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM116Q8NCL8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.66■□□□□ 0.42
TMEM116Q8NCL8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM116Q8NCL8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM116Q8NCL8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM116Q8NCL8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.66■□□□□ 0.42
TMEM116Q8NCL8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TMEM116Q8NCL8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM116Q8NCL8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM116Q8NCL8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TMEM116Q8NCL8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM116Q8NCL8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM116Q8NCL8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.66■□□□□ 0.42
TMEM116Q8NCL8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.66■□□□□ 0.42
TMEM116Q8NCL8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM116Q8NCL8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM116Q8NCL8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.65■□□□□ 0.42
TMEM116Q8NCL8 C1orf229-201ENST00000623686 2258 ntBASIC17.65■□□□□ 0.42
TMEM116Q8NCL8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM116Q8NCL8 AC004448.1-201ENST00000458332 883 ntBASIC17.65■□□□□ 0.42
TMEM116Q8NCL8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.65■□□□□ 0.42
TMEM116Q8NCL8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM116Q8NCL8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM116Q8NCL8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.65■□□□□ 0.42
TMEM116Q8NCL8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM116Q8NCL8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM116Q8NCL8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.65■□□□□ 0.42
TMEM116Q8NCL8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TMEM116Q8NCL8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TMEM116Q8NCL8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.64■□□□□ 0.42
TMEM116Q8NCL8 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM116Q8NCL8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
TMEM116Q8NCL8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM116Q8NCL8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM116Q8NCL8 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.64■□□□□ 0.41
TMEM116Q8NCL8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TMEM116Q8NCL8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM116Q8NCL8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM116Q8NCL8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM116Q8NCL8 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM116Q8NCL8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM116Q8NCL8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM116Q8NCL8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM116Q8NCL8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.63■□□□□ 0.41
TMEM116Q8NCL8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM116Q8NCL8 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.63■□□□□ 0.41
TMEM116Q8NCL8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.63■□□□□ 0.41
TMEM116Q8NCL8 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM116Q8NCL8 AC103834.1-201ENST00000520383 144 ntBASIC17.63■□□□□ 0.41
TMEM116Q8NCL8 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM116Q8NCL8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TMEM116Q8NCL8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM116Q8NCL8 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM116Q8NCL8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM116Q8NCL8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM116Q8NCL8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM116Q8NCL8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM116Q8NCL8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM116Q8NCL8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TMEM116Q8NCL8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM116Q8NCL8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.62■□□□□ 0.41
TMEM116Q8NCL8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM116Q8NCL8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TMEM116Q8NCL8 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
TMEM116Q8NCL8 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM116Q8NCL8 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM116Q8NCL8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM116Q8NCL8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.62■□□□□ 0.41
TMEM116Q8NCL8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TMEM116Q8NCL8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM116Q8NCL8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
TMEM116Q8NCL8 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM116Q8NCL8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TMEM116Q8NCL8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TMEM116Q8NCL8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM116Q8NCL8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM116Q8NCL8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.61■□□□□ 0.41
TMEM116Q8NCL8 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM116Q8NCL8 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM116Q8NCL8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM116Q8NCL8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM116Q8NCL8 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TMEM116Q8NCL8 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM116Q8NCL8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM116Q8NCL8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM116Q8NCL8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM116Q8NCL8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.6■□□□□ 0.41
TMEM116Q8NCL8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 493.6 ms