Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.01■□□□□ 0.79
NANOGP1Q8N7R0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NANOGP1Q8N7R0 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.01■□□□□ 0.79
NANOGP1Q8N7R0 AC131274.2-201ENST00000580697 1507 ntBASIC20.01■□□□□ 0.79
NANOGP1Q8N7R0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NANOGP1Q8N7R0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NANOGP1Q8N7R0 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NANOGP1Q8N7R0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NANOGP1Q8N7R0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20■□□□□ 0.79
NANOGP1Q8N7R0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NANOGP1Q8N7R0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20■□□□□ 0.79
NANOGP1Q8N7R0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20■□□□□ 0.79
NANOGP1Q8N7R0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
NANOGP1Q8N7R0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
NANOGP1Q8N7R0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NANOGP1Q8N7R0 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20■□□□□ 0.79
NANOGP1Q8N7R0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20■□□□□ 0.79
NANOGP1Q8N7R0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20■□□□□ 0.79
NANOGP1Q8N7R0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20■□□□□ 0.79
NANOGP1Q8N7R0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20■□□□□ 0.79
NANOGP1Q8N7R0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NANOGP1Q8N7R0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NANOGP1Q8N7R0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.99■□□□□ 0.79
NANOGP1Q8N7R0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.99■□□□□ 0.79
NANOGP1Q8N7R0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
NANOGP1Q8N7R0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.99■□□□□ 0.79
NANOGP1Q8N7R0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NANOGP1Q8N7R0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NANOGP1Q8N7R0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
NANOGP1Q8N7R0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NANOGP1Q8N7R0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
NANOGP1Q8N7R0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NANOGP1Q8N7R0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NANOGP1Q8N7R0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.98■□□□□ 0.79
NANOGP1Q8N7R0 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NANOGP1Q8N7R0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NANOGP1Q8N7R0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
NANOGP1Q8N7R0 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NANOGP1Q8N7R0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NANOGP1Q8N7R0 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NANOGP1Q8N7R0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NANOGP1Q8N7R0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NANOGP1Q8N7R0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NANOGP1Q8N7R0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NANOGP1Q8N7R0 FBXW4P1-201ENST00000426721 2239 ntBASIC19.98■□□□□ 0.79
NANOGP1Q8N7R0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
NANOGP1Q8N7R0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.97■□□□□ 0.79
NANOGP1Q8N7R0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.97■□□□□ 0.79
NANOGP1Q8N7R0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NANOGP1Q8N7R0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.97■□□□□ 0.79
NANOGP1Q8N7R0 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NANOGP1Q8N7R0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
NANOGP1Q8N7R0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NANOGP1Q8N7R0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.97■□□□□ 0.79
NANOGP1Q8N7R0 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
NANOGP1Q8N7R0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.97■□□□□ 0.79
NANOGP1Q8N7R0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.97■□□□□ 0.79
NANOGP1Q8N7R0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NANOGP1Q8N7R0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NANOGP1Q8N7R0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NANOGP1Q8N7R0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NANOGP1Q8N7R0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.97■□□□□ 0.79
NANOGP1Q8N7R0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
NANOGP1Q8N7R0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NANOGP1Q8N7R0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.96■□□□□ 0.79
NANOGP1Q8N7R0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NANOGP1Q8N7R0 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NANOGP1Q8N7R0 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NANOGP1Q8N7R0 AC080038.3-201ENST00000623346 1952 ntBASIC19.95■□□□□ 0.78
NANOGP1Q8N7R0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
NANOGP1Q8N7R0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NANOGP1Q8N7R0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.95■□□□□ 0.78
NANOGP1Q8N7R0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NANOGP1Q8N7R0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
NANOGP1Q8N7R0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NANOGP1Q8N7R0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
NANOGP1Q8N7R0 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
NANOGP1Q8N7R0 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.95■□□□□ 0.78
NANOGP1Q8N7R0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.95■□□□□ 0.78
NANOGP1Q8N7R0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
NANOGP1Q8N7R0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
NANOGP1Q8N7R0 AC009831.1-201ENST00000580420 1582 ntBASIC19.95■□□□□ 0.78
NANOGP1Q8N7R0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.95■□□□□ 0.78
NANOGP1Q8N7R0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NANOGP1Q8N7R0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NANOGP1Q8N7R0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NANOGP1Q8N7R0 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NANOGP1Q8N7R0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NANOGP1Q8N7R0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
NANOGP1Q8N7R0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NANOGP1Q8N7R0 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NANOGP1Q8N7R0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NANOGP1Q8N7R0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NANOGP1Q8N7R0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.94■□□□□ 0.78
NANOGP1Q8N7R0 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
NANOGP1Q8N7R0 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.93■□□□□ 0.78
NANOGP1Q8N7R0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NANOGP1Q8N7R0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
NANOGP1Q8N7R0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NANOGP1Q8N7R0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms