Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
ARHGEF28Q8N1W1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
ARHGEF28Q8N1W1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC31.49■■■□□ 2.63
ARHGEF28Q8N1W1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC31.49■■■□□ 2.63
ARHGEF28Q8N1W1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
ARHGEF28Q8N1W1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
ARHGEF28Q8N1W1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC31.48■■■□□ 2.63
ARHGEF28Q8N1W1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC31.48■■■□□ 2.63
ARHGEF28Q8N1W1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
ARHGEF28Q8N1W1 AC092666.2-201ENST00000613287 246 ntBASIC31.48■■■□□ 2.63
ARHGEF28Q8N1W1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
ARHGEF28Q8N1W1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
ARHGEF28Q8N1W1 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC31.47■■■□□ 2.63
ARHGEF28Q8N1W1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC31.47■■■□□ 2.63
ARHGEF28Q8N1W1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
ARHGEF28Q8N1W1 AC144652.1-201ENST00000609974 1624 ntBASIC31.47■■■□□ 2.63
ARHGEF28Q8N1W1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
ARHGEF28Q8N1W1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
ARHGEF28Q8N1W1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
ARHGEF28Q8N1W1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
ARHGEF28Q8N1W1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
ARHGEF28Q8N1W1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
ARHGEF28Q8N1W1 AK1-201ENST00000223836 736 ntTSL 3 BASIC31.46■■■□□ 2.63
ARHGEF28Q8N1W1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
ARHGEF28Q8N1W1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
ARHGEF28Q8N1W1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
ARHGEF28Q8N1W1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC31.45■■■□□ 2.63
ARHGEF28Q8N1W1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.63
ARHGEF28Q8N1W1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.63
ARHGEF28Q8N1W1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
ARHGEF28Q8N1W1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
ARHGEF28Q8N1W1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
ARHGEF28Q8N1W1 KRT18P5-201ENST00000436075 1291 ntBASIC31.44■■■□□ 2.62
ARHGEF28Q8N1W1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC31.44■■■□□ 2.62
ARHGEF28Q8N1W1 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
ARHGEF28Q8N1W1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
ARHGEF28Q8N1W1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC31.44■■■□□ 2.62
ARHGEF28Q8N1W1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
ARHGEF28Q8N1W1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC31.43■■■□□ 2.62
ARHGEF28Q8N1W1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
ARHGEF28Q8N1W1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
ARHGEF28Q8N1W1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC31.43■■■□□ 2.62
ARHGEF28Q8N1W1 AC034268.1-201ENST00000441047 882 ntBASIC31.43■■■□□ 2.62
ARHGEF28Q8N1W1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC31.43■■■□□ 2.62
ARHGEF28Q8N1W1 DUX4L2-201ENST00000561772 1275 ntBASIC31.43■■■□□ 2.62
ARHGEF28Q8N1W1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC31.43■■■□□ 2.62
ARHGEF28Q8N1W1 DUX4L6-201ENST00000626483 1275 ntBASIC31.43■■■□□ 2.62
ARHGEF28Q8N1W1 DUX4L1-201ENST00000627662 1275 ntBASIC31.43■■■□□ 2.62
ARHGEF28Q8N1W1 DUX4L8-201ENST00000629013 1275 ntBASIC31.43■■■□□ 2.62
ARHGEF28Q8N1W1 DUX4L3-201ENST00000630187 1275 ntBASIC31.43■■■□□ 2.62
ARHGEF28Q8N1W1 DUX4L7-201ENST00000630678 1275 ntBASIC31.43■■■□□ 2.62
ARHGEF28Q8N1W1 DUX4L5-201ENST00000630834 1275 ntBASIC31.43■■■□□ 2.62
ARHGEF28Q8N1W1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC31.42■■■□□ 2.62
ARHGEF28Q8N1W1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
ARHGEF28Q8N1W1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC31.42■■■□□ 2.62
ARHGEF28Q8N1W1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
ARHGEF28Q8N1W1 YBX1P1-201ENST00000445822 960 ntBASIC31.42■■■□□ 2.62
ARHGEF28Q8N1W1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC31.42■■■□□ 2.62
ARHGEF28Q8N1W1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC31.42■■■□□ 2.62
ARHGEF28Q8N1W1 DUX4L4-201ENST00000566884 1269 ntBASIC31.42■■■□□ 2.62
ARHGEF28Q8N1W1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
ARHGEF28Q8N1W1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC31.42■■■□□ 2.62
ARHGEF28Q8N1W1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC31.42■■■□□ 2.62
ARHGEF28Q8N1W1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
ARHGEF28Q8N1W1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
ARHGEF28Q8N1W1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
ARHGEF28Q8N1W1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
ARHGEF28Q8N1W1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
ARHGEF28Q8N1W1 MIR572-201ENST00000384983 95 ntBASIC31.41■■■□□ 2.62
ARHGEF28Q8N1W1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC31.41■■■□□ 2.62
ARHGEF28Q8N1W1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC31.41■■■□□ 2.62
ARHGEF28Q8N1W1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
ARHGEF28Q8N1W1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
ARHGEF28Q8N1W1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC31.41■■■□□ 2.62
ARHGEF28Q8N1W1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC31.4■■■□□ 2.62
ARHGEF28Q8N1W1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
ARHGEF28Q8N1W1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
ARHGEF28Q8N1W1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
ARHGEF28Q8N1W1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
ARHGEF28Q8N1W1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
ARHGEF28Q8N1W1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
ARHGEF28Q8N1W1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
ARHGEF28Q8N1W1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC31.39■■■□□ 2.62
ARHGEF28Q8N1W1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC31.39■■■□□ 2.62
ARHGEF28Q8N1W1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC31.38■■■□□ 2.61
ARHGEF28Q8N1W1 FP325331.1-202ENST00000623531 1380 ntBASIC31.38■■■□□ 2.61
ARHGEF28Q8N1W1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
ARHGEF28Q8N1W1 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
ARHGEF28Q8N1W1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC31.38■■■□□ 2.61
ARHGEF28Q8N1W1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
ARHGEF28Q8N1W1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC31.38■■■□□ 2.61
ARHGEF28Q8N1W1 AC079630.1-202ENST00000618127 1840 ntBASIC31.38■■■□□ 2.61
ARHGEF28Q8N1W1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC31.37■■■□□ 2.61
ARHGEF28Q8N1W1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC31.37■■■□□ 2.61
ARHGEF28Q8N1W1 LINC00543-201ENST00000567234 1845 ntBASIC31.37■■■□□ 2.61
ARHGEF28Q8N1W1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC31.37■■■□□ 2.61
ARHGEF28Q8N1W1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC31.37■■■□□ 2.61
ARHGEF28Q8N1W1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
ARHGEF28Q8N1W1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC31.36■■■□□ 2.61
ARHGEF28Q8N1W1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC31.36■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms