Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.47■■□□□ 1.03
COL27A1Q8IZC6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL27A1Q8IZC6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL27A1Q8IZC6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL27A1Q8IZC6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
COL27A1Q8IZC6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
COL27A1Q8IZC6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.46■■□□□ 1.03
COL27A1Q8IZC6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL27A1Q8IZC6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.46■■□□□ 1.03
COL27A1Q8IZC6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.46■■□□□ 1.03
COL27A1Q8IZC6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL27A1Q8IZC6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL27A1Q8IZC6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.46■■□□□ 1.03
COL27A1Q8IZC6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL27A1Q8IZC6 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL27A1Q8IZC6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
COL27A1Q8IZC6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
COL27A1Q8IZC6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.45■■□□□ 1.02
COL27A1Q8IZC6 AC004911.1-201ENST00000416316 871 ntBASIC21.45■■□□□ 1.02
COL27A1Q8IZC6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.45■■□□□ 1.02
COL27A1Q8IZC6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.45■■□□□ 1.02
COL27A1Q8IZC6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
COL27A1Q8IZC6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.45■■□□□ 1.02
COL27A1Q8IZC6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL27A1Q8IZC6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.44■■□□□ 1.02
COL27A1Q8IZC6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.44■■□□□ 1.02
COL27A1Q8IZC6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL27A1Q8IZC6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL27A1Q8IZC6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.44■■□□□ 1.02
COL27A1Q8IZC6 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL27A1Q8IZC6 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL27A1Q8IZC6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
COL27A1Q8IZC6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL27A1Q8IZC6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.44■■□□□ 1.02
COL27A1Q8IZC6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL27A1Q8IZC6 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.44■■□□□ 1.02
COL27A1Q8IZC6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL27A1Q8IZC6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.44■■□□□ 1.02
COL27A1Q8IZC6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL27A1Q8IZC6 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL27A1Q8IZC6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.44■■□□□ 1.02
COL27A1Q8IZC6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
COL27A1Q8IZC6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL27A1Q8IZC6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL27A1Q8IZC6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.43■■□□□ 1.02
COL27A1Q8IZC6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
COL27A1Q8IZC6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL27A1Q8IZC6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL27A1Q8IZC6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL27A1Q8IZC6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL27A1Q8IZC6 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.43■■□□□ 1.02
COL27A1Q8IZC6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.43■■□□□ 1.02
COL27A1Q8IZC6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
COL27A1Q8IZC6 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL27A1Q8IZC6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
COL27A1Q8IZC6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL27A1Q8IZC6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL27A1Q8IZC6 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL27A1Q8IZC6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.42■■□□□ 1.02
COL27A1Q8IZC6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.42■■□□□ 1.02
COL27A1Q8IZC6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
COL27A1Q8IZC6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.42■■□□□ 1.02
COL27A1Q8IZC6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL27A1Q8IZC6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.42■■□□□ 1.02
COL27A1Q8IZC6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.41■■□□□ 1.02
COL27A1Q8IZC6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.41■■□□□ 1.02
COL27A1Q8IZC6 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL27A1Q8IZC6 TPRG1LP1-201ENST00000598702 760 ntBASIC21.41■■□□□ 1.02
COL27A1Q8IZC6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL27A1Q8IZC6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.41■■□□□ 1.02
COL27A1Q8IZC6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
COL27A1Q8IZC6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL27A1Q8IZC6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL27A1Q8IZC6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.41■■□□□ 1.02
COL27A1Q8IZC6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.41■■□□□ 1.02
COL27A1Q8IZC6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL27A1Q8IZC6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
COL27A1Q8IZC6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL27A1Q8IZC6 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.4■■□□□ 1.02
COL27A1Q8IZC6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
COL27A1Q8IZC6 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL27A1Q8IZC6 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
COL27A1Q8IZC6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
COL27A1Q8IZC6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.4■■□□□ 1.02
COL27A1Q8IZC6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.4■■□□□ 1.02
COL27A1Q8IZC6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL27A1Q8IZC6 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.4■■□□□ 1.02
COL27A1Q8IZC6 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.4■■□□□ 1.02
COL27A1Q8IZC6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
COL27A1Q8IZC6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.39■■□□□ 1.02
COL27A1Q8IZC6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
COL27A1Q8IZC6 ID1-201ENST00000376105 1233 ntBASIC21.39■■□□□ 1.02
COL27A1Q8IZC6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
COL27A1Q8IZC6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.39■■□□□ 1.02
COL27A1Q8IZC6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL27A1Q8IZC6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
COL27A1Q8IZC6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
COL27A1Q8IZC6 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
COL27A1Q8IZC6 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL27A1Q8IZC6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms