Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MIR6724-3-201ENST00000622482 92 ntBASIC21.1■□□□□ 0.97
CCDC116Q8IYX3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC116Q8IYX3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC116Q8IYX3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC116Q8IYX3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC116Q8IYX3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC116Q8IYX3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC116Q8IYX3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
CCDC116Q8IYX3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
CCDC116Q8IYX3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.09■□□□□ 0.97
CCDC116Q8IYX3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.09■□□□□ 0.97
CCDC116Q8IYX3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC116Q8IYX3 AC068473.5-201ENST00000616428 2072 ntBASIC21.09■□□□□ 0.97
CCDC116Q8IYX3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.09■□□□□ 0.97
CCDC116Q8IYX3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC116Q8IYX3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC116Q8IYX3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CCDC116Q8IYX3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.08■□□□□ 0.97
CCDC116Q8IYX3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC116Q8IYX3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC116Q8IYX3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.08■□□□□ 0.97
CCDC116Q8IYX3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC116Q8IYX3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.08■□□□□ 0.96
CCDC116Q8IYX3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC116Q8IYX3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.08■□□□□ 0.96
CCDC116Q8IYX3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC116Q8IYX3 AL353803.4-201ENST00000565882 1934 ntBASIC21.08■□□□□ 0.96
CCDC116Q8IYX3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC116Q8IYX3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC116Q8IYX3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC116Q8IYX3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC116Q8IYX3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC116Q8IYX3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC116Q8IYX3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC116Q8IYX3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC116Q8IYX3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC116Q8IYX3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC116Q8IYX3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CCDC116Q8IYX3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC116Q8IYX3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC116Q8IYX3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC116Q8IYX3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CCDC116Q8IYX3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CCDC116Q8IYX3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC116Q8IYX3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC116Q8IYX3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC116Q8IYX3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC116Q8IYX3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC116Q8IYX3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CCDC116Q8IYX3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC116Q8IYX3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC116Q8IYX3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC116Q8IYX3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC116Q8IYX3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC116Q8IYX3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC116Q8IYX3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CCDC116Q8IYX3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC116Q8IYX3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC116Q8IYX3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC116Q8IYX3 AC144652.1-201ENST00000609974 1624 ntBASIC21.05■□□□□ 0.96
CCDC116Q8IYX3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC116Q8IYX3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC116Q8IYX3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC116Q8IYX3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC116Q8IYX3 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.05■□□□□ 0.96
CCDC116Q8IYX3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC116Q8IYX3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC116Q8IYX3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC116Q8IYX3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CCDC116Q8IYX3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC116Q8IYX3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC116Q8IYX3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC116Q8IYX3 AC009102.2-201ENST00000606772 1639 ntBASIC21.04■□□□□ 0.96
CCDC116Q8IYX3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CCDC116Q8IYX3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC116Q8IYX3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC116Q8IYX3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC116Q8IYX3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CCDC116Q8IYX3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC116Q8IYX3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC116Q8IYX3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC116Q8IYX3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC116Q8IYX3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC116Q8IYX3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC116Q8IYX3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CCDC116Q8IYX3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC116Q8IYX3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC116Q8IYX3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC116Q8IYX3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC116Q8IYX3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC116Q8IYX3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
CCDC116Q8IYX3 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC116Q8IYX3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC116Q8IYX3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC116Q8IYX3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC116Q8IYX3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CCDC116Q8IYX3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC116Q8IYX3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC116Q8IYX3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC116Q8IYX3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms