Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
DDX60Q8IY21 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
DDX60Q8IY21 EED-207ENST00000528180 1745 ntTSL 5 BASIC28■■■□□ 2.07
DDX60Q8IY21 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
DDX60Q8IY21 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
DDX60Q8IY21 KRT18P5-201ENST00000436075 1291 ntBASIC28■■■□□ 2.07
DDX60Q8IY21 AC034268.1-201ENST00000441047 882 ntBASIC28■■■□□ 2.07
DDX60Q8IY21 OR2I1P-207ENST00000453522 948 ntBASIC28■■■□□ 2.07
DDX60Q8IY21 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC28■■■□□ 2.07
DDX60Q8IY21 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
DDX60Q8IY21 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
DDX60Q8IY21 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
DDX60Q8IY21 AK1-201ENST00000223836 736 ntTSL 3 BASIC27.99■■■□□ 2.07
DDX60Q8IY21 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
DDX60Q8IY21 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC27.98■■■□□ 2.07
DDX60Q8IY21 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
DDX60Q8IY21 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
DDX60Q8IY21 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC27.98■■■□□ 2.07
DDX60Q8IY21 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC27.98■■■□□ 2.07
DDX60Q8IY21 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC27.98■■■□□ 2.07
DDX60Q8IY21 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
DDX60Q8IY21 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
DDX60Q8IY21 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC27.98■■■□□ 2.07
DDX60Q8IY21 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
DDX60Q8IY21 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC27.98■■■□□ 2.07
DDX60Q8IY21 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC27.98■■■□□ 2.07
DDX60Q8IY21 DUX4L2-201ENST00000561772 1275 ntBASIC27.98■■■□□ 2.07
DDX60Q8IY21 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC27.98■■■□□ 2.07
DDX60Q8IY21 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC27.98■■■□□ 2.07
DDX60Q8IY21 DUX4L6-201ENST00000626483 1275 ntBASIC27.98■■■□□ 2.07
DDX60Q8IY21 DUX4L1-201ENST00000627662 1275 ntBASIC27.98■■■□□ 2.07
DDX60Q8IY21 DUX4L8-201ENST00000629013 1275 ntBASIC27.98■■■□□ 2.07
DDX60Q8IY21 DUX4L3-201ENST00000630187 1275 ntBASIC27.98■■■□□ 2.07
DDX60Q8IY21 DUX4L7-201ENST00000630678 1275 ntBASIC27.98■■■□□ 2.07
DDX60Q8IY21 DUX4L5-201ENST00000630834 1275 ntBASIC27.98■■■□□ 2.07
DDX60Q8IY21 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
DDX60Q8IY21 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
DDX60Q8IY21 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
DDX60Q8IY21 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
DDX60Q8IY21 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
DDX60Q8IY21 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
DDX60Q8IY21 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC27.97■■■□□ 2.07
DDX60Q8IY21 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
DDX60Q8IY21 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
DDX60Q8IY21 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
DDX60Q8IY21 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC27.97■■■□□ 2.07
DDX60Q8IY21 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC27.96■■■□□ 2.07
DDX60Q8IY21 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
DDX60Q8IY21 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
DDX60Q8IY21 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC27.96■■■□□ 2.07
DDX60Q8IY21 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
DDX60Q8IY21 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
DDX60Q8IY21 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
DDX60Q8IY21 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
DDX60Q8IY21 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC27.96■■■□□ 2.07
DDX60Q8IY21 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
DDX60Q8IY21 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC27.95■■■□□ 2.07
DDX60Q8IY21 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
DDX60Q8IY21 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC27.95■■■□□ 2.07
DDX60Q8IY21 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC27.95■■■□□ 2.07
DDX60Q8IY21 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
DDX60Q8IY21 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC27.95■■■□□ 2.07
DDX60Q8IY21 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC27.95■■■□□ 2.06
DDX60Q8IY21 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
DDX60Q8IY21 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC27.94■■■□□ 2.06
DDX60Q8IY21 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
DDX60Q8IY21 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC27.94■■■□□ 2.06
DDX60Q8IY21 AC144652.1-201ENST00000609974 1624 ntBASIC27.94■■■□□ 2.06
DDX60Q8IY21 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
DDX60Q8IY21 MIR572-201ENST00000384983 95 ntBASIC27.94■■■□□ 2.06
DDX60Q8IY21 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC27.94■■■□□ 2.06
DDX60Q8IY21 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC27.94■■■□□ 2.06
DDX60Q8IY21 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC27.94■■■□□ 2.06
DDX60Q8IY21 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC27.94■■■□□ 2.06
DDX60Q8IY21 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
DDX60Q8IY21 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
DDX60Q8IY21 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
DDX60Q8IY21 YBX1P1-201ENST00000445822 960 ntBASIC27.93■■■□□ 2.06
DDX60Q8IY21 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
DDX60Q8IY21 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
DDX60Q8IY21 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC27.93■■■□□ 2.06
DDX60Q8IY21 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
DDX60Q8IY21 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC27.92■■■□□ 2.06
DDX60Q8IY21 IKBKGP1-201ENST00000612193 1073 ntBASIC27.92■■■□□ 2.06
DDX60Q8IY21 RAB43-208ENST00000615093 783 ntTSL 5 BASIC27.92■■■□□ 2.06
DDX60Q8IY21 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
DDX60Q8IY21 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC27.92■■■□□ 2.06
DDX60Q8IY21 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC27.92■■■□□ 2.06
DDX60Q8IY21 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
DDX60Q8IY21 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
DDX60Q8IY21 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC27.91■■■□□ 2.06
DDX60Q8IY21 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC27.91■■■□□ 2.06
DDX60Q8IY21 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC27.91■■■□□ 2.06
DDX60Q8IY21 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
DDX60Q8IY21 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC27.91■■■□□ 2.06
DDX60Q8IY21 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC27.91■■■□□ 2.06
DDX60Q8IY21 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC27.91■■■□□ 2.06
DDX60Q8IY21 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.91■■■□□ 2.06
DDX60Q8IY21 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
DDX60Q8IY21 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.91■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms