Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.9■■□□□ 1.1
TRIM48Q8IWZ4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM48Q8IWZ4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
TRIM48Q8IWZ4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM48Q8IWZ4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM48Q8IWZ4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM48Q8IWZ4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM48Q8IWZ4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
TRIM48Q8IWZ4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM48Q8IWZ4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM48Q8IWZ4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM48Q8IWZ4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM48Q8IWZ4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.89■■□□□ 1.09
TRIM48Q8IWZ4 AC006455.2-201ENST00000429931 906 ntBASIC21.89■■□□□ 1.09
TRIM48Q8IWZ4 AL138724.1-201ENST00000606771 1088 ntBASIC21.89■■□□□ 1.09
TRIM48Q8IWZ4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM48Q8IWZ4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
TRIM48Q8IWZ4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM48Q8IWZ4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
TRIM48Q8IWZ4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM48Q8IWZ4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM48Q8IWZ4 EDA-201ENST00000338901 1233 ntBASIC21.88■■□□□ 1.09
TRIM48Q8IWZ4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.88■■□□□ 1.09
TRIM48Q8IWZ4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.88■■□□□ 1.09
TRIM48Q8IWZ4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM48Q8IWZ4 AC004812.2-201ENST00000611079 2094 ntBASIC21.87■■□□□ 1.09
TRIM48Q8IWZ4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM48Q8IWZ4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM48Q8IWZ4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM48Q8IWZ4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.87■■□□□ 1.09
TRIM48Q8IWZ4 AC011298.3-201ENST00000615796 283 ntBASIC21.87■■□□□ 1.09
TRIM48Q8IWZ4 AL355001.2-201ENST00000620617 1191 ntBASIC21.87■■□□□ 1.09
TRIM48Q8IWZ4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM48Q8IWZ4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.87■■□□□ 1.09
TRIM48Q8IWZ4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRIM48Q8IWZ4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM48Q8IWZ4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM48Q8IWZ4 MIR4767-201ENST00000582827 78 ntBASIC21.86■■□□□ 1.09
TRIM48Q8IWZ4 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.86■■□□□ 1.09
TRIM48Q8IWZ4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
TRIM48Q8IWZ4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM48Q8IWZ4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.86■■□□□ 1.09
TRIM48Q8IWZ4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.86■■□□□ 1.09
TRIM48Q8IWZ4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM48Q8IWZ4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM48Q8IWZ4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM48Q8IWZ4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM48Q8IWZ4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM48Q8IWZ4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
TRIM48Q8IWZ4 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.85■■□□□ 1.09
TRIM48Q8IWZ4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM48Q8IWZ4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.85■■□□□ 1.09
TRIM48Q8IWZ4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.85■■□□□ 1.09
TRIM48Q8IWZ4 pRNA.6-201ENST00000610482 90 ntBASIC21.85■■□□□ 1.09
TRIM48Q8IWZ4 pRNA.5-201ENST00000612139 90 ntBASIC21.85■■□□□ 1.09
TRIM48Q8IWZ4 pRNA.11-201ENST00000618423 90 ntBASIC21.85■■□□□ 1.09
TRIM48Q8IWZ4 pRNA.13-201ENST00000619112 90 ntBASIC21.85■■□□□ 1.09
TRIM48Q8IWZ4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM48Q8IWZ4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.84■■□□□ 1.09
TRIM48Q8IWZ4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM48Q8IWZ4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM48Q8IWZ4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM48Q8IWZ4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM48Q8IWZ4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM48Q8IWZ4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.84■■□□□ 1.09
TRIM48Q8IWZ4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.84■■□□□ 1.09
TRIM48Q8IWZ4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM48Q8IWZ4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.84■■□□□ 1.09
TRIM48Q8IWZ4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.84■■□□□ 1.09
TRIM48Q8IWZ4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM48Q8IWZ4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM48Q8IWZ4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
TRIM48Q8IWZ4 ABCB10P4-201ENST00000566803 2184 ntBASIC21.83■■□□□ 1.09
TRIM48Q8IWZ4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.83■■□□□ 1.09
TRIM48Q8IWZ4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM48Q8IWZ4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM48Q8IWZ4 MIR3181-201ENST00000578512 73 ntBASIC21.83■■□□□ 1.09
TRIM48Q8IWZ4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.83■■□□□ 1.09
TRIM48Q8IWZ4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM48Q8IWZ4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM48Q8IWZ4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.83■■□□□ 1.08
TRIM48Q8IWZ4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM48Q8IWZ4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM48Q8IWZ4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
TRIM48Q8IWZ4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.82■■□□□ 1.08
TRIM48Q8IWZ4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.82■■□□□ 1.08
TRIM48Q8IWZ4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.82■■□□□ 1.08
TRIM48Q8IWZ4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
TRIM48Q8IWZ4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.82■■□□□ 1.08
TRIM48Q8IWZ4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.82■■□□□ 1.08
TRIM48Q8IWZ4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM48Q8IWZ4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM48Q8IWZ4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM48Q8IWZ4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM48Q8IWZ4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
TRIM48Q8IWZ4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM48Q8IWZ4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.81■■□□□ 1.08
TRIM48Q8IWZ4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM48Q8IWZ4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
TRIM48Q8IWZ4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms