Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.66■■□□□ 1.38
SCN4BQ8IWT1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.66■■□□□ 1.38
SCN4BQ8IWT1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.66■■□□□ 1.38
SCN4BQ8IWT1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
SCN4BQ8IWT1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.66■■□□□ 1.38
SCN4BQ8IWT1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SCN4BQ8IWT1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SCN4BQ8IWT1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SCN4BQ8IWT1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
SCN4BQ8IWT1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SCN4BQ8IWT1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SCN4BQ8IWT1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.65■■□□□ 1.38
SCN4BQ8IWT1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
SCN4BQ8IWT1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SCN4BQ8IWT1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SCN4BQ8IWT1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SCN4BQ8IWT1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SCN4BQ8IWT1 MIR939-201ENST00000401314 82 ntBASIC23.65■■□□□ 1.38
SCN4BQ8IWT1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.65■■□□□ 1.38
SCN4BQ8IWT1 AC008764.7-201ENST00000593779 1081 ntBASIC23.65■■□□□ 1.38
SCN4BQ8IWT1 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.65■■□□□ 1.38
SCN4BQ8IWT1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SCN4BQ8IWT1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SCN4BQ8IWT1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.64■■□□□ 1.38
SCN4BQ8IWT1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
SCN4BQ8IWT1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SCN4BQ8IWT1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.64■■□□□ 1.37
SCN4BQ8IWT1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
SCN4BQ8IWT1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SCN4BQ8IWT1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
SCN4BQ8IWT1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.63■■□□□ 1.37
SCN4BQ8IWT1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SCN4BQ8IWT1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SCN4BQ8IWT1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SCN4BQ8IWT1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
SCN4BQ8IWT1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SCN4BQ8IWT1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SCN4BQ8IWT1 ZNRF2P3-201ENST00000424200 374 ntBASIC23.63■■□□□ 1.37
SCN4BQ8IWT1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SCN4BQ8IWT1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.63■■□□□ 1.37
SCN4BQ8IWT1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.63■■□□□ 1.37
SCN4BQ8IWT1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
SCN4BQ8IWT1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.63■■□□□ 1.37
SCN4BQ8IWT1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.63■■□□□ 1.37
SCN4BQ8IWT1 AC144652.1-201ENST00000609974 1624 ntBASIC23.62■■□□□ 1.37
SCN4BQ8IWT1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SCN4BQ8IWT1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.62■■□□□ 1.37
SCN4BQ8IWT1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.62■■□□□ 1.37
SCN4BQ8IWT1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.62■■□□□ 1.37
SCN4BQ8IWT1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.62■■□□□ 1.37
SCN4BQ8IWT1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.62■■□□□ 1.37
SCN4BQ8IWT1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SCN4BQ8IWT1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SCN4BQ8IWT1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SCN4BQ8IWT1 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SCN4BQ8IWT1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SCN4BQ8IWT1 FP325331.1-202ENST00000623531 1380 ntBASIC23.62■■□□□ 1.37
SCN4BQ8IWT1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SCN4BQ8IWT1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SCN4BQ8IWT1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SCN4BQ8IWT1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.61■■□□□ 1.37
SCN4BQ8IWT1 AC091305.1-201ENST00000479476 895 ntBASIC23.61■■□□□ 1.37
SCN4BQ8IWT1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.61■■□□□ 1.37
SCN4BQ8IWT1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.61■■□□□ 1.37
SCN4BQ8IWT1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
SCN4BQ8IWT1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.61■■□□□ 1.37
SCN4BQ8IWT1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SCN4BQ8IWT1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
SCN4BQ8IWT1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SCN4BQ8IWT1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCN4BQ8IWT1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCN4BQ8IWT1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SCN4BQ8IWT1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.6■■□□□ 1.37
SCN4BQ8IWT1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCN4BQ8IWT1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCN4BQ8IWT1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCN4BQ8IWT1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCN4BQ8IWT1 AC105265.2-201ENST00000467189 838 ntBASIC23.6■■□□□ 1.37
SCN4BQ8IWT1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.6■■□□□ 1.37
SCN4BQ8IWT1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
SCN4BQ8IWT1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCN4BQ8IWT1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.6■■□□□ 1.37
SCN4BQ8IWT1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SCN4BQ8IWT1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SCN4BQ8IWT1 LINC01529-204ENST00000636474 1715 ntBASIC23.59■■□□□ 1.37
SCN4BQ8IWT1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SCN4BQ8IWT1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.59■■□□□ 1.37
SCN4BQ8IWT1 AC027682.1-201ENST00000562846 899 ntBASIC23.59■■□□□ 1.37
SCN4BQ8IWT1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
SCN4BQ8IWT1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
SCN4BQ8IWT1 AC099791.1-201ENST00000416440 715 ntBASIC23.58■■□□□ 1.37
SCN4BQ8IWT1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SCN4BQ8IWT1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
SCN4BQ8IWT1 DUX4L4-201ENST00000566884 1269 ntBASIC23.58■■□□□ 1.37
SCN4BQ8IWT1 CA15P2-201ENST00000611168 834 ntBASIC23.58■■□□□ 1.37
SCN4BQ8IWT1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
SCN4BQ8IWT1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SCN4BQ8IWT1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SCN4BQ8IWT1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SCN4BQ8IWT1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms