Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.7■□□□□ 0.74
LYSMD2Q8IV50 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LYSMD2Q8IV50 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LYSMD2Q8IV50 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
LYSMD2Q8IV50 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LYSMD2Q8IV50 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LYSMD2Q8IV50 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LYSMD2Q8IV50 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LYSMD2Q8IV50 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
LYSMD2Q8IV50 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LYSMD2Q8IV50 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LYSMD2Q8IV50 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.69■□□□□ 0.74
LYSMD2Q8IV50 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.68■□□□□ 0.74
LYSMD2Q8IV50 AC126177.7-201ENST00000547904 679 ntBASIC19.68■□□□□ 0.74
LYSMD2Q8IV50 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
LYSMD2Q8IV50 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.68■□□□□ 0.74
LYSMD2Q8IV50 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
LYSMD2Q8IV50 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
LYSMD2Q8IV50 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LYSMD2Q8IV50 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LYSMD2Q8IV50 AC005229.4-201ENST00000610085 2198 ntBASIC19.67■□□□□ 0.74
LYSMD2Q8IV50 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LYSMD2Q8IV50 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.67■□□□□ 0.74
LYSMD2Q8IV50 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LYSMD2Q8IV50 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LYSMD2Q8IV50 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LYSMD2Q8IV50 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LYSMD2Q8IV50 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.67■□□□□ 0.74
LYSMD2Q8IV50 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.67■□□□□ 0.74
LYSMD2Q8IV50 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LYSMD2Q8IV50 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LYSMD2Q8IV50 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LYSMD2Q8IV50 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.67■□□□□ 0.74
LYSMD2Q8IV50 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LYSMD2Q8IV50 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.66■□□□□ 0.74
LYSMD2Q8IV50 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LYSMD2Q8IV50 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LYSMD2Q8IV50 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.66■□□□□ 0.74
LYSMD2Q8IV50 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LYSMD2Q8IV50 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LYSMD2Q8IV50 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LYSMD2Q8IV50 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LYSMD2Q8IV50 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LYSMD2Q8IV50 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
LYSMD2Q8IV50 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.66■□□□□ 0.74
LYSMD2Q8IV50 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LYSMD2Q8IV50 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
LYSMD2Q8IV50 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.65■□□□□ 0.74
LYSMD2Q8IV50 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LYSMD2Q8IV50 AL391422.3-201ENST00000603791 2761 ntBASIC19.65■□□□□ 0.74
LYSMD2Q8IV50 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LYSMD2Q8IV50 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LYSMD2Q8IV50 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LYSMD2Q8IV50 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LYSMD2Q8IV50 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LYSMD2Q8IV50 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
LYSMD2Q8IV50 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LYSMD2Q8IV50 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LYSMD2Q8IV50 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LYSMD2Q8IV50 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
LYSMD2Q8IV50 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.64■□□□□ 0.73
LYSMD2Q8IV50 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LYSMD2Q8IV50 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LYSMD2Q8IV50 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LYSMD2Q8IV50 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.64■□□□□ 0.73
LYSMD2Q8IV50 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LYSMD2Q8IV50 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LYSMD2Q8IV50 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LYSMD2Q8IV50 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.63■□□□□ 0.73
LYSMD2Q8IV50 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.63■□□□□ 0.73
LYSMD2Q8IV50 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LYSMD2Q8IV50 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.63■□□□□ 0.73
LYSMD2Q8IV50 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.63■□□□□ 0.73
LYSMD2Q8IV50 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LYSMD2Q8IV50 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LYSMD2Q8IV50 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LYSMD2Q8IV50 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
LYSMD2Q8IV50 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LYSMD2Q8IV50 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LYSMD2Q8IV50 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LYSMD2Q8IV50 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LYSMD2Q8IV50 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.62■□□□□ 0.73
LYSMD2Q8IV50 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
LYSMD2Q8IV50 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LYSMD2Q8IV50 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LYSMD2Q8IV50 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LYSMD2Q8IV50 AC007952.6-201ENST00000573168 2673 ntBASIC19.62■□□□□ 0.73
LYSMD2Q8IV50 AC003957.1-201ENST00000625108 2673 ntBASIC19.62■□□□□ 0.73
LYSMD2Q8IV50 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LYSMD2Q8IV50 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LYSMD2Q8IV50 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LYSMD2Q8IV50 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LYSMD2Q8IV50 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LYSMD2Q8IV50 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.61■□□□□ 0.73
LYSMD2Q8IV50 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
LYSMD2Q8IV50 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LYSMD2Q8IV50 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.61■□□□□ 0.73
LYSMD2Q8IV50 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
LYSMD2Q8IV50 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
LYSMD2Q8IV50 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms