Protein–RNA interactions for Protein: Q86VH5

LRRTM3, Leucine-rich repeat transmembrane neuronal protein 3, humanhuman

Predictions only

Length 581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3Q86VH5 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
LRRTM3Q86VH5 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LRRTM3Q86VH5 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
LRRTM3Q86VH5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
LRRTM3Q86VH5 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.74■■□□□ 1.39
LRRTM3Q86VH5 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LRRTM3Q86VH5 AC144652.1-201ENST00000609974 1624 ntBASIC23.74■■□□□ 1.39
LRRTM3Q86VH5 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LRRTM3Q86VH5 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LRRTM3Q86VH5 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
LRRTM3Q86VH5 CA15P2-201ENST00000611168 834 ntBASIC23.74■■□□□ 1.39
LRRTM3Q86VH5 RASA4CP-201ENST00000424092 1398 ntBASIC23.74■■□□□ 1.39
LRRTM3Q86VH5 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
LRRTM3Q86VH5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.73■■□□□ 1.39
LRRTM3Q86VH5 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LRRTM3Q86VH5 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LRRTM3Q86VH5 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LRRTM3Q86VH5 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LRRTM3Q86VH5 AC099791.1-201ENST00000416440 715 ntBASIC23.73■■□□□ 1.39
LRRTM3Q86VH5 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
LRRTM3Q86VH5 DUX4L4-201ENST00000566884 1269 ntBASIC23.73■■□□□ 1.39
LRRTM3Q86VH5 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
LRRTM3Q86VH5 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
LRRTM3Q86VH5 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
LRRTM3Q86VH5 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LRRTM3Q86VH5 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.72■■□□□ 1.39
LRRTM3Q86VH5 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.72■■□□□ 1.39
LRRTM3Q86VH5 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.72■■□□□ 1.39
LRRTM3Q86VH5 AL499627.2-201ENST00000606283 725 ntBASIC23.72■■□□□ 1.39
LRRTM3Q86VH5 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
LRRTM3Q86VH5 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.72■■□□□ 1.39
LRRTM3Q86VH5 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
LRRTM3Q86VH5 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
LRRTM3Q86VH5 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRRTM3Q86VH5 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.71■■□□□ 1.39
LRRTM3Q86VH5 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRRTM3Q86VH5 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRRTM3Q86VH5 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
LRRTM3Q86VH5 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.71■■□□□ 1.39
LRRTM3Q86VH5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.71■■□□□ 1.39
LRRTM3Q86VH5 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRRTM3Q86VH5 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRRTM3Q86VH5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
LRRTM3Q86VH5 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.71■■□□□ 1.39
LRRTM3Q86VH5 AC027682.1-201ENST00000562846 899 ntBASIC23.71■■□□□ 1.39
LRRTM3Q86VH5 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRRTM3Q86VH5 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRRTM3Q86VH5 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
LRRTM3Q86VH5 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.7■■□□□ 1.39
LRRTM3Q86VH5 LINC01529-204ENST00000636474 1715 ntBASIC23.7■■□□□ 1.39
LRRTM3Q86VH5 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
LRRTM3Q86VH5 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.7■■□□□ 1.38
LRRTM3Q86VH5 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
LRRTM3Q86VH5 BX842568.3-201ENST00000418104 571 ntBASIC23.7■■□□□ 1.38
LRRTM3Q86VH5 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.7■■□□□ 1.38
LRRTM3Q86VH5 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.7■■□□□ 1.38
LRRTM3Q86VH5 AC233992.3-201ENST00000607491 485 ntBASIC23.7■■□□□ 1.38
LRRTM3Q86VH5 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.7■■□□□ 1.38
LRRTM3Q86VH5 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.7■■□□□ 1.38
LRRTM3Q86VH5 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
LRRTM3Q86VH5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LRRTM3Q86VH5 AC133637.1-201ENST00000624115 1537 ntBASIC23.69■■□□□ 1.38
LRRTM3Q86VH5 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LRRTM3Q86VH5 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LRRTM3Q86VH5 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
LRRTM3Q86VH5 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.69■■□□□ 1.38
LRRTM3Q86VH5 AC079630.1-202ENST00000618127 1840 ntBASIC23.69■■□□□ 1.38
LRRTM3Q86VH5 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
LRRTM3Q86VH5 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.69■■□□□ 1.38
LRRTM3Q86VH5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.69■■□□□ 1.38
LRRTM3Q86VH5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.69■■□□□ 1.38
LRRTM3Q86VH5 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
LRRTM3Q86VH5 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
LRRTM3Q86VH5 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LRRTM3Q86VH5 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LRRTM3Q86VH5 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.68■■□□□ 1.38
LRRTM3Q86VH5 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.68■■□□□ 1.38
LRRTM3Q86VH5 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LRRTM3Q86VH5 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LRRTM3Q86VH5 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LRRTM3Q86VH5 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
LRRTM3Q86VH5 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
LRRTM3Q86VH5 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LRRTM3Q86VH5 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LRRTM3Q86VH5 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.68■■□□□ 1.38
LRRTM3Q86VH5 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LRRTM3Q86VH5 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.68■■□□□ 1.38
LRRTM3Q86VH5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LRRTM3Q86VH5 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
LRRTM3Q86VH5 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.68■■□□□ 1.38
LRRTM3Q86VH5 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRRTM3Q86VH5 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
LRRTM3Q86VH5 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.67■■□□□ 1.38
LRRTM3Q86VH5 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRRTM3Q86VH5 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.67■■□□□ 1.38
LRRTM3Q86VH5 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRRTM3Q86VH5 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
LRRTM3Q86VH5 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.67■■□□□ 1.38
LRRTM3Q86VH5 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.67■■□□□ 1.38
LRRTM3Q86VH5 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms