Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LRRTM4Q86VH4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
LRRTM4Q86VH4 LINC01529-204ENST00000636474 1715 ntBASIC22.01■■□□□ 1.11
LRRTM4Q86VH4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.01■■□□□ 1.11
LRRTM4Q86VH4 MIR638-201ENST00000385237 100 ntBASIC22.01■■□□□ 1.11
LRRTM4Q86VH4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.01■■□□□ 1.11
LRRTM4Q86VH4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
LRRTM4Q86VH4 DUX4L4-201ENST00000566884 1269 ntBASIC22.01■■□□□ 1.11
LRRTM4Q86VH4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LRRTM4Q86VH4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
LRRTM4Q86VH4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LRRTM4Q86VH4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
LRRTM4Q86VH4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
LRRTM4Q86VH4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
LRRTM4Q86VH4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
LRRTM4Q86VH4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LRRTM4Q86VH4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22■■□□□ 1.11
LRRTM4Q86VH4 pRNA.6-201ENST00000610482 90 ntBASIC22■■□□□ 1.11
LRRTM4Q86VH4 pRNA.5-201ENST00000612139 90 ntBASIC22■■□□□ 1.11
LRRTM4Q86VH4 AC011298.3-201ENST00000615796 283 ntBASIC22■■□□□ 1.11
LRRTM4Q86VH4 pRNA.11-201ENST00000618423 90 ntBASIC22■■□□□ 1.11
LRRTM4Q86VH4 pRNA.13-201ENST00000619112 90 ntBASIC22■■□□□ 1.11
LRRTM4Q86VH4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22■■□□□ 1.11
LRRTM4Q86VH4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LRRTM4Q86VH4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
LRRTM4Q86VH4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LRRTM4Q86VH4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LRRTM4Q86VH4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
LRRTM4Q86VH4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LRRTM4Q86VH4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRRTM4Q86VH4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.99■■□□□ 1.11
LRRTM4Q86VH4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LRRTM4Q86VH4 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.99■■□□□ 1.11
LRRTM4Q86VH4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.99■■□□□ 1.11
LRRTM4Q86VH4 AC133561.4-201ENST00000566112 224 ntBASIC21.99■■□□□ 1.11
LRRTM4Q86VH4 MIR3181-201ENST00000578512 73 ntBASIC21.99■■□□□ 1.11
LRRTM4Q86VH4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
LRRTM4Q86VH4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.99■■□□□ 1.11
LRRTM4Q86VH4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRRTM4Q86VH4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LRRTM4Q86VH4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
LRRTM4Q86VH4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LRRTM4Q86VH4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRRTM4Q86VH4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.98■■□□□ 1.11
LRRTM4Q86VH4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRRTM4Q86VH4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRRTM4Q86VH4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.98■■□□□ 1.11
LRRTM4Q86VH4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.98■■□□□ 1.11
LRRTM4Q86VH4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRRTM4Q86VH4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRRTM4Q86VH4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.98■■□□□ 1.11
LRRTM4Q86VH4 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.98■■□□□ 1.11
LRRTM4Q86VH4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.98■■□□□ 1.11
LRRTM4Q86VH4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRRTM4Q86VH4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.97■■□□□ 1.11
LRRTM4Q86VH4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.97■■□□□ 1.11
LRRTM4Q86VH4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.97■■□□□ 1.11
LRRTM4Q86VH4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
LRRTM4Q86VH4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.97■■□□□ 1.11
LRRTM4Q86VH4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
LRRTM4Q86VH4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRRTM4Q86VH4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRRTM4Q86VH4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
LRRTM4Q86VH4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRRTM4Q86VH4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRRTM4Q86VH4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LRRTM4Q86VH4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.96■■□□□ 1.11
LRRTM4Q86VH4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.96■■□□□ 1.11
LRRTM4Q86VH4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.96■■□□□ 1.11
LRRTM4Q86VH4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRRTM4Q86VH4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.96■■□□□ 1.11
LRRTM4Q86VH4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.96■■□□□ 1.11
LRRTM4Q86VH4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRRTM4Q86VH4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.95■■□□□ 1.1
LRRTM4Q86VH4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LRRTM4Q86VH4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
LRRTM4Q86VH4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.95■■□□□ 1.1
LRRTM4Q86VH4 MIR4767-201ENST00000582827 78 ntBASIC21.95■■□□□ 1.1
LRRTM4Q86VH4 AC136469.2-201ENST00000623944 1028 ntBASIC21.95■■□□□ 1.1
LRRTM4Q86VH4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.95■■□□□ 1.1
LRRTM4Q86VH4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRTM4Q86VH4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRTM4Q86VH4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.94■■□□□ 1.1
LRRTM4Q86VH4 AL499627.2-201ENST00000606283 725 ntBASIC21.94■■□□□ 1.1
LRRTM4Q86VH4 AC005837.3-201ENST00000612163 286 ntBASIC21.94■■□□□ 1.1
LRRTM4Q86VH4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRTM4Q86VH4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.94■■□□□ 1.1
LRRTM4Q86VH4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRTM4Q86VH4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.94■■□□□ 1.1
LRRTM4Q86VH4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRTM4Q86VH4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRRTM4Q86VH4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRRTM4Q86VH4 EDA-201ENST00000338901 1233 ntBASIC21.93■■□□□ 1.1
LRRTM4Q86VH4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRRTM4Q86VH4 ANOS2P-203ENST00000472227 1816 ntBASIC21.93■■□□□ 1.1
LRRTM4Q86VH4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.93■■□□□ 1.1
LRRTM4Q86VH4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.93■■□□□ 1.1
LRRTM4Q86VH4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LRRTM4Q86VH4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.93■■□□□ 1.1
LRRTM4Q86VH4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms