Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC25.11■■□□□ 1.61
RNF180Q86T96 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RNF180Q86T96 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RNF180Q86T96 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RNF180Q86T96 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RNF180Q86T96 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RNF180Q86T96 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
RNF180Q86T96 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.09■■□□□ 1.61
RNF180Q86T96 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RNF180Q86T96 AC010525.1-201ENST00000585559 441 ntBASIC25.09■■□□□ 1.61
RNF180Q86T96 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RNF180Q86T96 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RNF180Q86T96 MPST-204ENST00000404393 1329 ntTSL 5 BASIC25.09■■□□□ 1.61
RNF180Q86T96 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC25.08■■□□□ 1.61
RNF180Q86T96 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
RNF180Q86T96 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.08■■□□□ 1.61
RNF180Q86T96 ME3-201ENST00000323418 1068 ntTSL 5 BASIC25.08■■□□□ 1.61
RNF180Q86T96 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RNF180Q86T96 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC25.08■■□□□ 1.61
RNF180Q86T96 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC25.08■■□□□ 1.61
RNF180Q86T96 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.08■■□□□ 1.61
RNF180Q86T96 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RNF180Q86T96 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC25.08■■□□□ 1.61
RNF180Q86T96 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
RNF180Q86T96 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
RNF180Q86T96 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
RNF180Q86T96 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.08■■□□□ 1.6
RNF180Q86T96 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
RNF180Q86T96 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RNF180Q86T96 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RNF180Q86T96 NT5C3AP1-201ENST00000394500 1012 ntBASIC25.07■■□□□ 1.6
RNF180Q86T96 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC25.07■■□□□ 1.6
RNF180Q86T96 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC25.07■■□□□ 1.6
RNF180Q86T96 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC25.07■■□□□ 1.6
RNF180Q86T96 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.07■■□□□ 1.6
RNF180Q86T96 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RNF180Q86T96 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.07■■□□□ 1.6
RNF180Q86T96 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
RNF180Q86T96 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
RNF180Q86T96 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.06■■□□□ 1.6
RNF180Q86T96 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RNF180Q86T96 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RNF180Q86T96 AP005435.1-201ENST00000529293 1178 ntBASIC25.06■■□□□ 1.6
RNF180Q86T96 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.06■■□□□ 1.6
RNF180Q86T96 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RNF180Q86T96 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RNF180Q86T96 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.05■■□□□ 1.6
RNF180Q86T96 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.05■■□□□ 1.6
RNF180Q86T96 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RNF180Q86T96 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.05■■□□□ 1.6
RNF180Q86T96 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RNF180Q86T96 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RNF180Q86T96 DENND3-207ENST00000518347 850 ntTSL 2 BASIC25.05■■□□□ 1.6
RNF180Q86T96 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
RNF180Q86T96 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
RNF180Q86T96 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.05■■□□□ 1.6
RNF180Q86T96 AC091060.1-201ENST00000623524 1766 ntBASIC25.05■■□□□ 1.6
RNF180Q86T96 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.05■■□□□ 1.6
RNF180Q86T96 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF180Q86T96 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.04■■□□□ 1.6
RNF180Q86T96 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF180Q86T96 AC145676.1-201ENST00000514988 2004 ntBASIC25.04■■□□□ 1.6
RNF180Q86T96 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF180Q86T96 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RNF180Q86T96 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC25.04■■□□□ 1.6
RNF180Q86T96 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RNF180Q86T96 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF180Q86T96 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF180Q86T96 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF180Q86T96 FP325331.1-202ENST00000623531 1380 ntBASIC25.04■■□□□ 1.6
RNF180Q86T96 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF180Q86T96 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF180Q86T96 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC25.03■■□□□ 1.6
RNF180Q86T96 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF180Q86T96 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.03■■□□□ 1.6
RNF180Q86T96 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
RNF180Q86T96 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF180Q86T96 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC25.03■■□□□ 1.6
RNF180Q86T96 AC105233.4-201ENST00000642045 216 ntBASIC25.03■■□□□ 1.6
RNF180Q86T96 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC25.03■■□□□ 1.6
RNF180Q86T96 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
RNF180Q86T96 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
RNF180Q86T96 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC25.02■■□□□ 1.6
RNF180Q86T96 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
RNF180Q86T96 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
RNF180Q86T96 HLA-L-209ENST00000420110 1011 ntBASIC25.02■■□□□ 1.6
RNF180Q86T96 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
RNF180Q86T96 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC25.02■■□□□ 1.6
RNF180Q86T96 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC25.01■■□□□ 1.59
RNF180Q86T96 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RNF180Q86T96 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RNF180Q86T96 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC25.01■■□□□ 1.59
RNF180Q86T96 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC25.01■■□□□ 1.59
RNF180Q86T96 DUX4L4-201ENST00000566884 1269 ntBASIC25.01■■□□□ 1.59
RNF180Q86T96 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC25.01■■□□□ 1.59
RNF180Q86T96 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC25.01■■□□□ 1.59
RNF180Q86T96 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RNF180Q86T96 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RNF180Q86T96 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC25.01■■□□□ 1.59
RNF180Q86T96 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms