Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
USP50Q70EL3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
USP50Q70EL3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
USP50Q70EL3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC26.93■■□□□ 1.9
USP50Q70EL3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC26.93■■□□□ 1.9
USP50Q70EL3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC26.93■■□□□ 1.9
USP50Q70EL3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC26.93■■□□□ 1.9
USP50Q70EL3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
USP50Q70EL3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC26.93■■□□□ 1.9
USP50Q70EL3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
USP50Q70EL3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC26.93■■□□□ 1.9
USP50Q70EL3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.92■■□□□ 1.9
USP50Q70EL3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC26.92■■□□□ 1.9
USP50Q70EL3 CROCCP5-201ENST00000436658 830 ntBASIC26.92■■□□□ 1.9
USP50Q70EL3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC26.92■■□□□ 1.9
USP50Q70EL3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC26.92■■□□□ 1.9
USP50Q70EL3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
USP50Q70EL3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
USP50Q70EL3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC26.91■■□□□ 1.9
USP50Q70EL3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC26.91■■□□□ 1.9
USP50Q70EL3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC26.91■■□□□ 1.9
USP50Q70EL3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
USP50Q70EL3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC26.91■■□□□ 1.9
USP50Q70EL3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC26.91■■□□□ 1.9
USP50Q70EL3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC26.91■■□□□ 1.9
USP50Q70EL3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
USP50Q70EL3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC26.91■■□□□ 1.9
USP50Q70EL3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
USP50Q70EL3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
USP50Q70EL3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.91■■□□□ 1.9
USP50Q70EL3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC26.91■■□□□ 1.9
USP50Q70EL3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
USP50Q70EL3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC26.9■■□□□ 1.9
USP50Q70EL3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26.9■■□□□ 1.9
USP50Q70EL3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
USP50Q70EL3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
USP50Q70EL3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
USP50Q70EL3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
USP50Q70EL3 NCF1B-203ENST00000435988 1254 ntBASIC26.9■■□□□ 1.9
USP50Q70EL3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC26.9■■□□□ 1.9
USP50Q70EL3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC26.9■■□□□ 1.9
USP50Q70EL3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
USP50Q70EL3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
USP50Q70EL3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
USP50Q70EL3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
USP50Q70EL3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC26.89■■□□□ 1.9
USP50Q70EL3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC26.89■■□□□ 1.9
USP50Q70EL3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
USP50Q70EL3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC26.89■■□□□ 1.9
USP50Q70EL3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC26.89■■□□□ 1.9
USP50Q70EL3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC26.89■■□□□ 1.9
USP50Q70EL3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.89
USP50Q70EL3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
USP50Q70EL3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
USP50Q70EL3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.88■■□□□ 1.89
USP50Q70EL3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC26.88■■□□□ 1.89
USP50Q70EL3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
USP50Q70EL3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC26.88■■□□□ 1.89
USP50Q70EL3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
USP50Q70EL3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.88■■□□□ 1.89
USP50Q70EL3 ALDH1A3-203ENST00000557963 1670 ntBASIC26.88■■□□□ 1.89
USP50Q70EL3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
USP50Q70EL3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
USP50Q70EL3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.88■■□□□ 1.89
USP50Q70EL3 AP004607.4-201ENST00000530158 1459 ntBASIC26.87■■□□□ 1.89
USP50Q70EL3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
USP50Q70EL3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC26.87■■□□□ 1.89
USP50Q70EL3 AC066615.1-201ENST00000640911 628 ntBASIC26.87■■□□□ 1.89
USP50Q70EL3 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
USP50Q70EL3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
USP50Q70EL3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
USP50Q70EL3 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
USP50Q70EL3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
USP50Q70EL3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
USP50Q70EL3 COX20-201ENST00000366528 568 ntTSL 2 BASIC26.86■■□□□ 1.89
USP50Q70EL3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
USP50Q70EL3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC26.86■■□□□ 1.89
USP50Q70EL3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
USP50Q70EL3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
USP50Q70EL3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.86■■□□□ 1.89
USP50Q70EL3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.86■■□□□ 1.89
USP50Q70EL3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
USP50Q70EL3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
USP50Q70EL3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC26.85■■□□□ 1.89
USP50Q70EL3 TPRG1LP1-201ENST00000598702 760 ntBASIC26.85■■□□□ 1.89
USP50Q70EL3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC26.85■■□□□ 1.89
USP50Q70EL3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
USP50Q70EL3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
USP50Q70EL3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC26.84■■□□□ 1.89
USP50Q70EL3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
USP50Q70EL3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
USP50Q70EL3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC26.84■■□□□ 1.89
USP50Q70EL3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
USP50Q70EL3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC26.84■■□□□ 1.89
USP50Q70EL3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
USP50Q70EL3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
USP50Q70EL3 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
USP50Q70EL3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
USP50Q70EL3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
USP50Q70EL3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC26.83■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms