Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.9■□□□□ 0.62
VPS13CQ709C8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
VPS13CQ709C8 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.9■□□□□ 0.62
VPS13CQ709C8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.9■□□□□ 0.62
VPS13CQ709C8 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS13CQ709C8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS13CQ709C8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS13CQ709C8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.89■□□□□ 0.62
VPS13CQ709C8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
VPS13CQ709C8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.89■□□□□ 0.62
VPS13CQ709C8 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VPS13CQ709C8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS13CQ709C8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VPS13CQ709C8 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.89■□□□□ 0.61
VPS13CQ709C8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.89■□□□□ 0.61
VPS13CQ709C8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VPS13CQ709C8 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS13CQ709C8 AC133637.1-201ENST00000624115 1537 ntBASIC18.89■□□□□ 0.61
VPS13CQ709C8 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.89■□□□□ 0.61
VPS13CQ709C8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.89■□□□□ 0.61
VPS13CQ709C8 AC092171.4-201ENST00000609130 632 ntBASIC18.89■□□□□ 0.61
VPS13CQ709C8 AC241377.3-202ENST00000626088 1088 ntBASIC18.89■□□□□ 0.61
VPS13CQ709C8 AC241585.3-202ENST00000628937 1088 ntBASIC18.89■□□□□ 0.61
VPS13CQ709C8 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VPS13CQ709C8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.89■□□□□ 0.61
VPS13CQ709C8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS13CQ709C8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS13CQ709C8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS13CQ709C8 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.88■□□□□ 0.61
VPS13CQ709C8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS13CQ709C8 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS13CQ709C8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS13CQ709C8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS13CQ709C8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VPS13CQ709C8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.88■□□□□ 0.61
VPS13CQ709C8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS13CQ709C8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VPS13CQ709C8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
VPS13CQ709C8 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.88■□□□□ 0.61
VPS13CQ709C8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VPS13CQ709C8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS13CQ709C8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS13CQ709C8 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS13CQ709C8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.87■□□□□ 0.61
VPS13CQ709C8 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS13CQ709C8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS13CQ709C8 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS13CQ709C8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
VPS13CQ709C8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VPS13CQ709C8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.87■□□□□ 0.61
VPS13CQ709C8 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.87■□□□□ 0.61
VPS13CQ709C8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.87■□□□□ 0.61
VPS13CQ709C8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.86■□□□□ 0.61
VPS13CQ709C8 KRT18P6-201ENST00000555540 1265 ntBASIC18.86■□□□□ 0.61
VPS13CQ709C8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS13CQ709C8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS13CQ709C8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS13CQ709C8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VPS13CQ709C8 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VPS13CQ709C8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
VPS13CQ709C8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
VPS13CQ709C8 AL022069.1-201ENST00000568025 1636 ntBASIC18.85■□□□□ 0.61
VPS13CQ709C8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS13CQ709C8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VPS13CQ709C8 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS13CQ709C8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.85■□□□□ 0.61
VPS13CQ709C8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VPS13CQ709C8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.85■□□□□ 0.61
VPS13CQ709C8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.85■□□□□ 0.61
VPS13CQ709C8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
VPS13CQ709C8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
VPS13CQ709C8 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.84■□□□□ 0.61
VPS13CQ709C8 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.84■□□□□ 0.61
VPS13CQ709C8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VPS13CQ709C8 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS13CQ709C8 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS13CQ709C8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
VPS13CQ709C8 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS13CQ709C8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.84■□□□□ 0.61
VPS13CQ709C8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS13CQ709C8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
VPS13CQ709C8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.84■□□□□ 0.61
VPS13CQ709C8 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
VPS13CQ709C8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VPS13CQ709C8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
VPS13CQ709C8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.84■□□□□ 0.61
VPS13CQ709C8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VPS13CQ709C8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VPS13CQ709C8 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.84■□□□□ 0.61
VPS13CQ709C8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
VPS13CQ709C8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VPS13CQ709C8 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.84■□□□□ 0.61
VPS13CQ709C8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.84■□□□□ 0.61
VPS13CQ709C8 AL354811.1-201ENST00000610286 706 ntBASIC18.83■□□□□ 0.6
VPS13CQ709C8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
VPS13CQ709C8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS13CQ709C8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.83■□□□□ 0.6
VPS13CQ709C8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.83■□□□□ 0.6
VPS13CQ709C8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
VPS13CQ709C8 AC080038.1-201ENST00000611274 1154 ntBASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms