Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.35■□□□□ 0.69
COLCA1Q6ZS62 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.35■□□□□ 0.69
COLCA1Q6ZS62 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COLCA1Q6ZS62 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.35■□□□□ 0.69
COLCA1Q6ZS62 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COLCA1Q6ZS62 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COLCA1Q6ZS62 AC012676.1-201ENST00000574705 1949 ntBASIC19.34■□□□□ 0.69
COLCA1Q6ZS62 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COLCA1Q6ZS62 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.34■□□□□ 0.69
COLCA1Q6ZS62 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.34■□□□□ 0.69
COLCA1Q6ZS62 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COLCA1Q6ZS62 C17orf82-201ENST00000623772 1530 ntBASIC19.34■□□□□ 0.69
COLCA1Q6ZS62 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.34■□□□□ 0.69
COLCA1Q6ZS62 LINC01529-204ENST00000636474 1715 ntBASIC19.34■□□□□ 0.69
COLCA1Q6ZS62 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
COLCA1Q6ZS62 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.33■□□□□ 0.69
COLCA1Q6ZS62 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
COLCA1Q6ZS62 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
COLCA1Q6ZS62 C9orf163-202ENST00000624034 2573 ntBASIC19.33■□□□□ 0.69
COLCA1Q6ZS62 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.33■□□□□ 0.68
COLCA1Q6ZS62 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.33■□□□□ 0.68
COLCA1Q6ZS62 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.33■□□□□ 0.68
COLCA1Q6ZS62 MIR3621-201ENST00000580529 85 ntBASIC19.33■□□□□ 0.68
COLCA1Q6ZS62 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COLCA1Q6ZS62 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
COLCA1Q6ZS62 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.33■□□□□ 0.68
COLCA1Q6ZS62 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.33■□□□□ 0.68
COLCA1Q6ZS62 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.33■□□□□ 0.68
COLCA1Q6ZS62 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
COLCA1Q6ZS62 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
COLCA1Q6ZS62 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
COLCA1Q6ZS62 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COLCA1Q6ZS62 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
COLCA1Q6ZS62 DUX4L4-201ENST00000566884 1269 ntBASIC19.32■□□□□ 0.68
COLCA1Q6ZS62 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.32■□□□□ 0.68
COLCA1Q6ZS62 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
COLCA1Q6ZS62 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.32■□□□□ 0.68
COLCA1Q6ZS62 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
COLCA1Q6ZS62 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
COLCA1Q6ZS62 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COLCA1Q6ZS62 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.32■□□□□ 0.68
COLCA1Q6ZS62 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
COLCA1Q6ZS62 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COLCA1Q6ZS62 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COLCA1Q6ZS62 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.31■□□□□ 0.68
COLCA1Q6ZS62 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
COLCA1Q6ZS62 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.31■□□□□ 0.68
COLCA1Q6ZS62 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.31■□□□□ 0.68
COLCA1Q6ZS62 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.31■□□□□ 0.68
COLCA1Q6ZS62 AL117332.1-201ENST00000622628 974 ntBASIC19.31■□□□□ 0.68
COLCA1Q6ZS62 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.31■□□□□ 0.68
COLCA1Q6ZS62 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.31■□□□□ 0.68
COLCA1Q6ZS62 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
COLCA1Q6ZS62 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COLCA1Q6ZS62 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COLCA1Q6ZS62 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.31■□□□□ 0.68
COLCA1Q6ZS62 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
COLCA1Q6ZS62 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COLCA1Q6ZS62 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.3■□□□□ 0.68
COLCA1Q6ZS62 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
COLCA1Q6ZS62 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
COLCA1Q6ZS62 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COLCA1Q6ZS62 AL356441.2-201ENST00000443009 864 ntBASIC19.3■□□□□ 0.68
COLCA1Q6ZS62 AL356740.2-201ENST00000601559 647 ntBASIC19.3■□□□□ 0.68
COLCA1Q6ZS62 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
COLCA1Q6ZS62 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COLCA1Q6ZS62 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COLCA1Q6ZS62 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
COLCA1Q6ZS62 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COLCA1Q6ZS62 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COLCA1Q6ZS62 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.29■□□□□ 0.68
COLCA1Q6ZS62 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
COLCA1Q6ZS62 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.29■□□□□ 0.68
COLCA1Q6ZS62 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.29■□□□□ 0.68
COLCA1Q6ZS62 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
COLCA1Q6ZS62 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COLCA1Q6ZS62 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.29■□□□□ 0.68
COLCA1Q6ZS62 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.29■□□□□ 0.68
COLCA1Q6ZS62 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COLCA1Q6ZS62 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COLCA1Q6ZS62 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COLCA1Q6ZS62 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COLCA1Q6ZS62 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
COLCA1Q6ZS62 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.28■□□□□ 0.68
COLCA1Q6ZS62 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
COLCA1Q6ZS62 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COLCA1Q6ZS62 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
COLCA1Q6ZS62 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
COLCA1Q6ZS62 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.28■□□□□ 0.68
COLCA1Q6ZS62 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.28■□□□□ 0.68
COLCA1Q6ZS62 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
COLCA1Q6ZS62 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COLCA1Q6ZS62 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COLCA1Q6ZS62 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COLCA1Q6ZS62 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.68
COLCA1Q6ZS62 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COLCA1Q6ZS62 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.27■□□□□ 0.68
COLCA1Q6ZS62 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
COLCA1Q6ZS62 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
COLCA1Q6ZS62 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms