Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTL4Q6ZR62 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.88■□□□□ 0.93
RTL4Q6ZR62 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RTL4Q6ZR62 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTL4Q6ZR62 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTL4Q6ZR62 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTL4Q6ZR62 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTL4Q6ZR62 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.87■□□□□ 0.93
RTL4Q6ZR62 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RTL4Q6ZR62 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.87■□□□□ 0.93
RTL4Q6ZR62 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.87■□□□□ 0.93
RTL4Q6ZR62 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
RTL4Q6ZR62 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTL4Q6ZR62 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
RTL4Q6ZR62 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.87■□□□□ 0.93
RTL4Q6ZR62 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.87■□□□□ 0.93
RTL4Q6ZR62 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTL4Q6ZR62 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.87■□□□□ 0.93
RTL4Q6ZR62 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.87■□□□□ 0.93
RTL4Q6ZR62 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTL4Q6ZR62 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTL4Q6ZR62 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTL4Q6ZR62 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTL4Q6ZR62 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RTL4Q6ZR62 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RTL4Q6ZR62 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTL4Q6ZR62 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.86■□□□□ 0.93
RTL4Q6ZR62 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTL4Q6ZR62 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.86■□□□□ 0.93
RTL4Q6ZR62 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RTL4Q6ZR62 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.86■□□□□ 0.93
RTL4Q6ZR62 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.86■□□□□ 0.93
RTL4Q6ZR62 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTL4Q6ZR62 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.86■□□□□ 0.93
RTL4Q6ZR62 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
RTL4Q6ZR62 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTL4Q6ZR62 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTL4Q6ZR62 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.86■□□□□ 0.93
RTL4Q6ZR62 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTL4Q6ZR62 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTL4Q6ZR62 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTL4Q6ZR62 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTL4Q6ZR62 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTL4Q6ZR62 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.85■□□□□ 0.93
RTL4Q6ZR62 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTL4Q6ZR62 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTL4Q6ZR62 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTL4Q6ZR62 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTL4Q6ZR62 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
RTL4Q6ZR62 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTL4Q6ZR62 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTL4Q6ZR62 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.84■□□□□ 0.93
RTL4Q6ZR62 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTL4Q6ZR62 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.84■□□□□ 0.93
RTL4Q6ZR62 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTL4Q6ZR62 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTL4Q6ZR62 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.84■□□□□ 0.93
RTL4Q6ZR62 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.84■□□□□ 0.93
RTL4Q6ZR62 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTL4Q6ZR62 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RTL4Q6ZR62 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTL4Q6ZR62 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTL4Q6ZR62 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RTL4Q6ZR62 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTL4Q6ZR62 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RTL4Q6ZR62 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTL4Q6ZR62 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTL4Q6ZR62 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTL4Q6ZR62 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.83■□□□□ 0.93
RTL4Q6ZR62 AL139246.5-201ENST00000606645 996 ntBASIC20.83■□□□□ 0.93
RTL4Q6ZR62 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTL4Q6ZR62 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RTL4Q6ZR62 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.82■□□□□ 0.92
RTL4Q6ZR62 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.82■□□□□ 0.92
RTL4Q6ZR62 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTL4Q6ZR62 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL4Q6ZR62 AC096631.2-201ENST00000436136 790 ntBASIC20.82■□□□□ 0.92
RTL4Q6ZR62 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTL4Q6ZR62 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.82■□□□□ 0.92
RTL4Q6ZR62 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL4Q6ZR62 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL4Q6ZR62 AC009102.2-201ENST00000606772 1639 ntBASIC20.82■□□□□ 0.92
RTL4Q6ZR62 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTL4Q6ZR62 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.81■□□□□ 0.92
RTL4Q6ZR62 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTL4Q6ZR62 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RTL4Q6ZR62 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTL4Q6ZR62 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTL4Q6ZR62 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.81■□□□□ 0.92
RTL4Q6ZR62 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTL4Q6ZR62 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.81■□□□□ 0.92
RTL4Q6ZR62 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.81■□□□□ 0.92
RTL4Q6ZR62 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RTL4Q6ZR62 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTL4Q6ZR62 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTL4Q6ZR62 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RTL4Q6ZR62 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.81■□□□□ 0.92
RTL4Q6ZR62 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.81■□□□□ 0.92
RTL4Q6ZR62 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RTL4Q6ZR62 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms